Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNF44Q7L0R7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RNF44Q7L0R7 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNF44Q7L0R7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNF44Q7L0R7 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 AL583805.1-201ENST00000391389 531 ntBASIC13.58□□□□□ -0.24
RNF44Q7L0R7 AC073869.2-201ENST00000417338 1026 ntBASIC13.58□□□□□ -0.24
RNF44Q7L0R7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 RPL8P2-201ENST00000430538 502 ntBASIC13.58□□□□□ -0.24
RNF44Q7L0R7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 CHCHD2P2-201ENST00000503744 321 ntBASIC13.58□□□□□ -0.24
RNF44Q7L0R7 ALG1L13P-202ENST00000519320 584 ntBASIC13.58□□□□□ -0.24
RNF44Q7L0R7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 MIR3907-201ENST00000579424 151 ntBASIC13.58□□□□□ -0.24
RNF44Q7L0R7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 AL133499.1-201ENST00000596207 608 ntBASIC13.58□□□□□ -0.24
RNF44Q7L0R7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF44Q7L0R7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 MIR645-201ENST00000385283 94 ntBASIC13.57□□□□□ -0.24
RNF44Q7L0R7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.57□□□□□ -0.24
RNF44Q7L0R7 AC006987.1-201ENST00000413610 527 ntBASIC13.57□□□□□ -0.24
RNF44Q7L0R7 BX679664.3-201ENST00000414070 555 ntBASIC13.57□□□□□ -0.24
RNF44Q7L0R7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 AC113935.1-201ENST00000471722 555 ntBASIC13.57□□□□□ -0.24
RNF44Q7L0R7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 RHOQP1-201ENST00000555758 579 ntBASIC13.57□□□□□ -0.24
RNF44Q7L0R7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms