Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.27■□□□□ 0.04
SNRPFP62306 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.27■□□□□ 0.04
SNRPFP62306 AL592076.1-201ENST00000424448 303 ntBASIC15.27■□□□□ 0.04
SNRPFP62306 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.27■□□□□ 0.04
SNRPFP62306 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.27■□□□□ 0.04
SNRPFP62306 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.27■□□□□ 0.04
SNRPFP62306 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.27■□□□□ 0.04
SNRPFP62306 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.27■□□□□ 0.04
SNRPFP62306 MIR4265-201ENST00000582152 99 ntBASIC15.27■□□□□ 0.04
SNRPFP62306 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNRPFP62306 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNRPFP62306 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNRPFP62306 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNRPFP62306 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.27■□□□□ 0.03
SNRPFP62306 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SNRPFP62306 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.27■□□□□ 0.03
SNRPFP62306 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.27■□□□□ 0.03
SNRPFP62306 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNRPFP62306 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNRPFP62306 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SNRPFP62306 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNRPFP62306 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.27■□□□□ 0.03
SNRPFP62306 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
SNRPFP62306 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SNRPFP62306 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SNRPFP62306 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.26■□□□□ 0.03
SNRPFP62306 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SNRPFP62306 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SNRPFP62306 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.26■□□□□ 0.03
SNRPFP62306 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SNRPFP62306 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.26■□□□□ 0.03
SNRPFP62306 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
SNRPFP62306 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 AC012044.1-201ENST00000603431 297 ntBASIC15.26■□□□□ 0.03
SNRPFP62306 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.26■□□□□ 0.03
SNRPFP62306 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SNRPFP62306 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRPFP62306 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.25■□□□□ 0.03
SNRPFP62306 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.25■□□□□ 0.03
SNRPFP62306 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.25■□□□□ 0.03
SNRPFP62306 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.25■□□□□ 0.03
SNRPFP62306 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SNRPFP62306 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SNRPFP62306 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 AC005722.1-201ENST00000431878 964 ntBASIC15.25■□□□□ 0.03
SNRPFP62306 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SNRPFP62306 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.25■□□□□ 0.03
SNRPFP62306 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.25■□□□□ 0.03
SNRPFP62306 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.25■□□□□ 0.03
SNRPFP62306 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.25■□□□□ 0.03
SNRPFP62306 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
SNRPFP62306 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNRPFP62306 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.25■□□□□ 0.03
SNRPFP62306 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SNRPFP62306 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms