Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN2P17655 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CAPN2P17655 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN2P17655 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN2P17655 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.38■□□□□ 0.21
CAPN2P17655 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.38■□□□□ 0.21
CAPN2P17655 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CAPN2P17655 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 AC012508.2-201ENST00000567613 1472 ntBASIC16.38■□□□□ 0.21
CAPN2P17655 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CAPN2P17655 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CAPN2P17655 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CAPN2P17655 AL357373.1-201ENST00000394974 322 ntBASIC16.38■□□□□ 0.21
CAPN2P17655 KRT18P36-201ENST00000411618 1276 ntBASIC16.38■□□□□ 0.21
CAPN2P17655 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN2P17655 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.38■□□□□ 0.21
CAPN2P17655 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN2P17655 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.38■□□□□ 0.21
CAPN2P17655 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN2P17655 HERC2P11-201ENST00000562845 725 ntBASIC16.38■□□□□ 0.21
CAPN2P17655 AC100756.2-201ENST00000569537 736 ntBASIC16.38■□□□□ 0.21
CAPN2P17655 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.38■□□□□ 0.21
CAPN2P17655 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.38■□□□□ 0.21
CAPN2P17655 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.38■□□□□ 0.21
CAPN2P17655 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN2P17655 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.38■□□□□ 0.21
CAPN2P17655 CICP16-201ENST00000502609 2813 ntBASIC16.38■□□□□ 0.21
CAPN2P17655 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.38■□□□□ 0.21
CAPN2P17655 AC021305.1-201ENST00000520656 1514 ntBASIC16.38■□□□□ 0.21
CAPN2P17655 AC126365.1-201ENST00000578585 1514 ntBASIC16.38■□□□□ 0.21
CAPN2P17655 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CAPN2P17655 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN2P17655 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN2P17655 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 IL9RP3-201ENST00000442856 1674 ntBASIC16.37■□□□□ 0.21
CAPN2P17655 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CAPN2P17655 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.37■□□□□ 0.21
CAPN2P17655 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CAPN2P17655 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.37■□□□□ 0.21
CAPN2P17655 MIR1301-201ENST00000408518 82 ntBASIC16.37■□□□□ 0.21
CAPN2P17655 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.37■□□□□ 0.21
CAPN2P17655 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 ERP29P1-201ENST00000442902 706 ntBASIC16.37■□□□□ 0.21
CAPN2P17655 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 RN7SL396P-201ENST00000471086 295 ntBASIC16.37■□□□□ 0.21
CAPN2P17655 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CAPN2P17655 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.37■□□□□ 0.21
CAPN2P17655 AC105206.1-202ENST00000314927 2368 ntBASIC16.37■□□□□ 0.21
CAPN2P17655 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 AC019294.4-201ENST00000561777 2905 ntBASIC16.37■□□□□ 0.21
CAPN2P17655 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN2P17655 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms