Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
KRT6AP02538 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.77□□□□□ -0.2
KRT6AP02538 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
KRT6AP02538 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
KRT6AP02538 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
KRT6AP02538 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
KRT6AP02538 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
KRT6AP02538 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.77□□□□□ -0.21
KRT6AP02538 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.77□□□□□ -0.21
KRT6AP02538 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
KRT6AP02538 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
KRT6AP02538 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 KRT18P36-201ENST00000411618 1276 ntBASIC13.77□□□□□ -0.21
KRT6AP02538 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 SHMT1P1-201ENST00000419974 1312 ntBASIC13.77□□□□□ -0.21
KRT6AP02538 HLA-V-201ENST00000429037 534 ntBASIC13.77□□□□□ -0.21
KRT6AP02538 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.77□□□□□ -0.21
KRT6AP02538 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.77□□□□□ -0.21
KRT6AP02538 CSF2RBP1-201ENST00000447905 391 ntBASIC13.77□□□□□ -0.21
KRT6AP02538 RCC2P1-201ENST00000452257 1476 ntBASIC13.77□□□□□ -0.21
KRT6AP02538 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
KRT6AP02538 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.77□□□□□ -0.21
KRT6AP02538 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.77□□□□□ -0.21
KRT6AP02538 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.77□□□□□ -0.21
KRT6AP02538 MIR497HG-202ENST00000572453 3838 ntBASIC13.77□□□□□ -0.21
KRT6AP02538 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.77□□□□□ -0.21
KRT6AP02538 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
KRT6AP02538 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.77□□□□□ -0.21
KRT6AP02538 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.77□□□□□ -0.21
KRT6AP02538 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.77□□□□□ -0.21
KRT6AP02538 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.77□□□□□ -0.21
KRT6AP02538 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.77□□□□□ -0.21
KRT6AP02538 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KRT6AP02538 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
KRT6AP02538 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
KRT6AP02538 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
KRT6AP02538 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.76□□□□□ -0.21
KRT6AP02538 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 ANKRD19P-201ENST00000338192 862 ntBASIC13.76□□□□□ -0.21
KRT6AP02538 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 MIR1909-201ENST00000411312 80 ntBASIC13.76□□□□□ -0.21
KRT6AP02538 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 OR2R1P-201ENST00000441404 914 ntBASIC13.76□□□□□ -0.21
KRT6AP02538 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.76□□□□□ -0.21
KRT6AP02538 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 AC021723.1-201ENST00000486306 515 ntBASIC13.76□□□□□ -0.21
KRT6AP02538 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.76□□□□□ -0.21
KRT6AP02538 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.76□□□□□ -0.21
KRT6AP02538 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 AC008805.1-201ENST00000590892 364 ntBASIC13.76□□□□□ -0.21
KRT6AP02538 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.76□□□□□ -0.21
KRT6AP02538 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KRT6AP02538 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.76□□□□□ -0.21
KRT6AP02538 LINC02084-201ENST00000606069 1096 ntBASIC13.76□□□□□ -0.21
KRT6AP02538 AP000346.4-201ENST00000614827 381 ntBASIC13.76□□□□□ -0.21
KRT6AP02538 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.76□□□□□ -0.21
KRT6AP02538 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.76□□□□□ -0.21
KRT6AP02538 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
KRT6AP02538 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms