Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.01□□□□□ -0.33
NKX2-2O95096 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 AC114947.1-202ENST00000514136 344 ntBASIC13.01□□□□□ -0.33
NKX2-2O95096 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NKX2-2O95096 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NKX2-2O95096 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
NKX2-2O95096 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX2-2O95096 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
NKX2-2O95096 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.01□□□□□ -0.33
NKX2-2O95096 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.01□□□□□ -0.33
NKX2-2O95096 MIR4525-201ENST00000580000 75 ntBASIC13.01□□□□□ -0.33
NKX2-2O95096 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.01□□□□□ -0.33
NKX2-2O95096 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX2-2O95096 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.01□□□□□ -0.33
NKX2-2O95096 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
NKX2-2O95096 AC244093.1-201ENST00000610837 814 ntBASIC13.01□□□□□ -0.33
NKX2-2O95096 AL161773.1-201ENST00000624845 863 ntBASIC13.01□□□□□ -0.33
NKX2-2O95096 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX2-2O95096 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 AC008132.1-202ENST00000342005 1389 ntBASIC13.01□□□□□ -0.33
NKX2-2O95096 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 KRT8P31-201ENST00000504812 1408 ntBASIC13.01□□□□□ -0.33
NKX2-2O95096 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX2-2O95096 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX2-2O95096 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX2-2O95096 AC020917.4-201ENST00000623994 1999 ntBASIC13.01□□□□□ -0.33
NKX2-2O95096 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX2-2O95096 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX2-2O95096 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX2-2O95096 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX2-2O95096 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13□□□□□ -0.33
NKX2-2O95096 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 MIR645-201ENST00000385283 94 ntBASIC13□□□□□ -0.33
NKX2-2O95096 KRTAP19-9P-201ENST00000421795 191 ntBASIC13□□□□□ -0.33
NKX2-2O95096 PPP1R2P4-201ENST00000424051 595 ntBASIC13□□□□□ -0.33
NKX2-2O95096 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 DNAJB1P1-201ENST00000429417 1024 ntBASIC13□□□□□ -0.33
NKX2-2O95096 CALR4P-201ENST00000431943 946 ntBASIC13□□□□□ -0.33
NKX2-2O95096 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13□□□□□ -0.33
NKX2-2O95096 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 RN7SL11P-201ENST00000471305 293 ntBASIC13□□□□□ -0.33
NKX2-2O95096 RN7SL258P-201ENST00000478664 300 ntBASIC13□□□□□ -0.33
NKX2-2O95096 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 AC024681.1-201ENST00000521917 487 ntBASIC13□□□□□ -0.33
NKX2-2O95096 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
NKX2-2O95096 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13□□□□□ -0.33
NKX2-2O95096 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13□□□□□ -0.33
NKX2-2O95096 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13□□□□□ -0.33
NKX2-2O95096 AL109837.1-201ENST00000603272 613 ntBASIC13□□□□□ -0.33
NKX2-2O95096 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13□□□□□ -0.33
NKX2-2O95096 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NKX2-2O95096 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 AGAP12P-201ENST00000585227 2359 ntBASIC13□□□□□ -0.33
NKX2-2O95096 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NKX2-2O95096 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NKX2-2O95096 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NKX2-2O95096 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13□□□□□ -0.33
NKX2-2O95096 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13□□□□□ -0.33
NKX2-2O95096 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX2-2O95096 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX2-2O95096 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms