Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KDM3AQ9Y4C1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
KDM3AQ9Y4C1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 SRD5A1P1-201ENST00000442297 786 ntBASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
KDM3AQ9Y4C1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
KDM3AQ9Y4C1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.34■■□□□ 1.65
KDM3AQ9Y4C1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
KDM3AQ9Y4C1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KDM3AQ9Y4C1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.34■■□□□ 1.65
KDM3AQ9Y4C1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
KDM3AQ9Y4C1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
KDM3AQ9Y4C1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
KDM3AQ9Y4C1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.33■■□□□ 1.65
KDM3AQ9Y4C1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
KDM3AQ9Y4C1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
KDM3AQ9Y4C1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
KDM3AQ9Y4C1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
KDM3AQ9Y4C1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KDM3AQ9Y4C1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
KDM3AQ9Y4C1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.32■■□□□ 1.64
KDM3AQ9Y4C1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KDM3AQ9Y4C1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KDM3AQ9Y4C1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.32■■□□□ 1.64
KDM3AQ9Y4C1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
KDM3AQ9Y4C1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KDM3AQ9Y4C1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KDM3AQ9Y4C1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KDM3AQ9Y4C1 UNC93B3-201ENST00000308076 687 ntBASIC25.31■■□□□ 1.64
KDM3AQ9Y4C1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.31■■□□□ 1.64
KDM3AQ9Y4C1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KDM3AQ9Y4C1 PBX2P1-201ENST00000493219 1291 ntBASIC25.31■■□□□ 1.64
KDM3AQ9Y4C1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
KDM3AQ9Y4C1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
KDM3AQ9Y4C1 ANOS2P-203ENST00000472227 1816 ntBASIC25.3■■□□□ 1.64
KDM3AQ9Y4C1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
KDM3AQ9Y4C1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
KDM3AQ9Y4C1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KDM3AQ9Y4C1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
KDM3AQ9Y4C1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KDM3AQ9Y4C1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.3■■□□□ 1.64
KDM3AQ9Y4C1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
KDM3AQ9Y4C1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KDM3AQ9Y4C1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
KDM3AQ9Y4C1 AC092068.2-201ENST00000590491 1708 ntBASIC25.29■■□□□ 1.64
KDM3AQ9Y4C1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
KDM3AQ9Y4C1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
KDM3AQ9Y4C1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.29■■□□□ 1.64
KDM3AQ9Y4C1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
KDM3AQ9Y4C1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.29■■□□□ 1.64
KDM3AQ9Y4C1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.29■■□□□ 1.64
KDM3AQ9Y4C1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.29■■□□□ 1.64
KDM3AQ9Y4C1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 AL031432.3-201ENST00000607698 485 ntBASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
KDM3AQ9Y4C1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
KDM3AQ9Y4C1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.27■■□□□ 1.64
KDM3AQ9Y4C1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
KDM3AQ9Y4C1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
KDM3AQ9Y4C1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.27■■□□□ 1.64
KDM3AQ9Y4C1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
KDM3AQ9Y4C1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.27■■□□□ 1.64
KDM3AQ9Y4C1 AL136162.1-201ENST00000607711 1078 ntBASIC25.27■■□□□ 1.64
KDM3AQ9Y4C1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.27■■□□□ 1.64
KDM3AQ9Y4C1 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms