Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LSM2Q9Y333 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM2Q9Y333 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM2Q9Y333 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM2Q9Y333 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM2Q9Y333 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.06■□□□□ 0.8
LSM2Q9Y333 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.06■□□□□ 0.8
LSM2Q9Y333 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSM2Q9Y333 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM2Q9Y333 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.05■□□□□ 0.8
LSM2Q9Y333 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LSM2Q9Y333 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM2Q9Y333 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LSM2Q9Y333 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.05■□□□□ 0.8
LSM2Q9Y333 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.05■□□□□ 0.8
LSM2Q9Y333 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM2Q9Y333 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM2Q9Y333 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.04■□□□□ 0.8
LSM2Q9Y333 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM2Q9Y333 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM2Q9Y333 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.04■□□□□ 0.8
LSM2Q9Y333 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.04■□□□□ 0.8
LSM2Q9Y333 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.04■□□□□ 0.8
LSM2Q9Y333 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM2Q9Y333 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
LSM2Q9Y333 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM2Q9Y333 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM2Q9Y333 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LSM2Q9Y333 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM2Q9Y333 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LSM2Q9Y333 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.03■□□□□ 0.8
LSM2Q9Y333 FBXW4P1-201ENST00000426721 2239 ntBASIC20.03■□□□□ 0.8
LSM2Q9Y333 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
LSM2Q9Y333 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LSM2Q9Y333 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
LSM2Q9Y333 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LSM2Q9Y333 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.03■□□□□ 0.8
LSM2Q9Y333 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM2Q9Y333 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM2Q9Y333 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM2Q9Y333 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM2Q9Y333 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM2Q9Y333 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LSM2Q9Y333 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM2Q9Y333 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM2Q9Y333 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM2Q9Y333 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM2Q9Y333 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM2Q9Y333 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LSM2Q9Y333 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.02■□□□□ 0.8
LSM2Q9Y333 AC079630.1-202ENST00000618127 1840 ntBASIC20.02■□□□□ 0.79
LSM2Q9Y333 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LSM2Q9Y333 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.01■□□□□ 0.79
LSM2Q9Y333 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSM2Q9Y333 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LSM2Q9Y333 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LSM2Q9Y333 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.01■□□□□ 0.79
LSM2Q9Y333 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.01■□□□□ 0.79
LSM2Q9Y333 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSM2Q9Y333 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSM2Q9Y333 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
LSM2Q9Y333 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
LSM2Q9Y333 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
LSM2Q9Y333 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM2Q9Y333 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20■□□□□ 0.79
LSM2Q9Y333 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20■□□□□ 0.79
LSM2Q9Y333 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LSM2Q9Y333 AC131274.2-201ENST00000580697 1507 ntBASIC20■□□□□ 0.79
LSM2Q9Y333 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM2Q9Y333 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM2Q9Y333 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSM2Q9Y333 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSM2Q9Y333 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM2Q9Y333 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM2Q9Y333 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LSM2Q9Y333 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.99■□□□□ 0.79
LSM2Q9Y333 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.99■□□□□ 0.79
LSM2Q9Y333 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LSM2Q9Y333 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.99■□□□□ 0.79
LSM2Q9Y333 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM2Q9Y333 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM2Q9Y333 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
LSM2Q9Y333 AC080038.3-201ENST00000623346 1952 ntBASIC19.99■□□□□ 0.79
LSM2Q9Y333 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LSM2Q9Y333 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM2Q9Y333 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM2Q9Y333 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.98■□□□□ 0.79
LSM2Q9Y333 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM2Q9Y333 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms