Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 AC066615.1-201ENST00000640911 628 ntBASIC25.95■■□□□ 1.74
PTPN22Q9Y2R2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PTPN22Q9Y2R2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PTPN22Q9Y2R2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PTPN22Q9Y2R2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PTPN22Q9Y2R2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.94■■□□□ 1.74
PTPN22Q9Y2R2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.94■■□□□ 1.74
PTPN22Q9Y2R2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PTPN22Q9Y2R2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.94■■□□□ 1.74
PTPN22Q9Y2R2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PTPN22Q9Y2R2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
PTPN22Q9Y2R2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.94■■□□□ 1.74
PTPN22Q9Y2R2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.94■■□□□ 1.74
PTPN22Q9Y2R2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PTPN22Q9Y2R2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PTPN22Q9Y2R2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.93■■□□□ 1.74
PTPN22Q9Y2R2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PTPN22Q9Y2R2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
PTPN22Q9Y2R2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.93■■□□□ 1.74
PTPN22Q9Y2R2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PTPN22Q9Y2R2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PTPN22Q9Y2R2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.93■■□□□ 1.74
PTPN22Q9Y2R2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PTPN22Q9Y2R2 AC091060.1-201ENST00000623524 1766 ntBASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTPN22Q9Y2R2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PTPN22Q9Y2R2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PTPN22Q9Y2R2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PTPN22Q9Y2R2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.91■■□□□ 1.74
PTPN22Q9Y2R2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.91■■□□□ 1.74
PTPN22Q9Y2R2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.91■■□□□ 1.74
PTPN22Q9Y2R2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PTPN22Q9Y2R2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
PTPN22Q9Y2R2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PTPN22Q9Y2R2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PTPN22Q9Y2R2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTPN22Q9Y2R2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTPN22Q9Y2R2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
PTPN22Q9Y2R2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PTPN22Q9Y2R2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.9■■□□□ 1.74
PTPN22Q9Y2R2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTPN22Q9Y2R2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.9■■□□□ 1.74
PTPN22Q9Y2R2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
PTPN22Q9Y2R2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.9■■□□□ 1.74
PTPN22Q9Y2R2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 AL355802.2-201ENST00000402069 882 ntBASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 AC026185.1-201ENST00000445748 174 ntBASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PTPN22Q9Y2R2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PTPN22Q9Y2R2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.88■■□□□ 1.73
PTPN22Q9Y2R2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.88■■□□□ 1.73
PTPN22Q9Y2R2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTPN22Q9Y2R2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
PTPN22Q9Y2R2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTPN22Q9Y2R2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.88■■□□□ 1.73
PTPN22Q9Y2R2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.88■■□□□ 1.73
PTPN22Q9Y2R2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.88■■□□□ 1.73
PTPN22Q9Y2R2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.88■■□□□ 1.73
PTPN22Q9Y2R2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PTPN22Q9Y2R2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.87■■□□□ 1.73
PTPN22Q9Y2R2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTPN22Q9Y2R2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.87■■□□□ 1.73
PTPN22Q9Y2R2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PTPN22Q9Y2R2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PTPN22Q9Y2R2 AL109923.1-201ENST00000618799 583 ntBASIC25.87■■□□□ 1.73
PTPN22Q9Y2R2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
PTPN22Q9Y2R2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PTPN22Q9Y2R2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTPN22Q9Y2R2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTPN22Q9Y2R2 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.86■■□□□ 1.73
PTPN22Q9Y2R2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PTPN22Q9Y2R2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
PTPN22Q9Y2R2 AC016769.1-201ENST00000409132 1010 ntBASIC25.86■■□□□ 1.73
PTPN22Q9Y2R2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
PTPN22Q9Y2R2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTPN22Q9Y2R2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
PTPN22Q9Y2R2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTPN22Q9Y2R2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms