Protein–RNA interactions for Protein: Q9UPE1

SRPK3, SRSF protein kinase 3, humanhuman

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3Q9UPE1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SRPK3Q9UPE1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRPK3Q9UPE1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.3■■□□□ 1
SRPK3Q9UPE1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRPK3Q9UPE1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRPK3Q9UPE1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SRPK3Q9UPE1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRPK3Q9UPE1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRPK3Q9UPE1 MIR939-201ENST00000401314 82 ntBASIC21.3■■□□□ 1
SRPK3Q9UPE1 AC091305.1-201ENST00000479476 895 ntBASIC21.3■■□□□ 1
SRPK3Q9UPE1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.3■■□□□ 1
SRPK3Q9UPE1 AC027682.1-201ENST00000562846 899 ntBASIC21.3■■□□□ 1
SRPK3Q9UPE1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.3■■□□□ 1
SRPK3Q9UPE1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.3■■□□□ 1
SRPK3Q9UPE1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.3■■□□□ 1
SRPK3Q9UPE1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRPK3Q9UPE1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRPK3Q9UPE1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SRPK3Q9UPE1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.29■■□□□ 1
SRPK3Q9UPE1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPK3Q9UPE1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.29■■□□□ 1
SRPK3Q9UPE1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.29■■□□□ 1
SRPK3Q9UPE1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.29■■□□□ 1
SRPK3Q9UPE1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRPK3Q9UPE1 FP325331.1-202ENST00000623531 1380 ntBASIC21.29■■□□□ 1
SRPK3Q9UPE1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPK3Q9UPE1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPK3Q9UPE1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPK3Q9UPE1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPK3Q9UPE1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRPK3Q9UPE1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
SRPK3Q9UPE1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SRPK3Q9UPE1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SRPK3Q9UPE1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.28■■□□□ 1
SRPK3Q9UPE1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRPK3Q9UPE1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRPK3Q9UPE1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SRPK3Q9UPE1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRPK3Q9UPE1 pRNA.6-201ENST00000610482 90 ntBASIC21.28■■□□□ 1
SRPK3Q9UPE1 pRNA.5-201ENST00000612139 90 ntBASIC21.28■■□□□ 1
SRPK3Q9UPE1 pRNA.11-201ENST00000618423 90 ntBASIC21.28■■□□□ 1
SRPK3Q9UPE1 pRNA.13-201ENST00000619112 90 ntBASIC21.28■■□□□ 1
SRPK3Q9UPE1 AL136967.2-201ENST00000623968 743 ntBASIC21.28■■□□□ 1
SRPK3Q9UPE1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
SRPK3Q9UPE1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SRPK3Q9UPE1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.27■■□□□ 1
SRPK3Q9UPE1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.27■■□□□ 1
SRPK3Q9UPE1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRPK3Q9UPE1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.26■□□□□ 0.99
SRPK3Q9UPE1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.26■□□□□ 0.99
SRPK3Q9UPE1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.26■□□□□ 0.99
SRPK3Q9UPE1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.26■□□□□ 0.99
SRPK3Q9UPE1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SRPK3Q9UPE1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SRPK3Q9UPE1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SRPK3Q9UPE1 RASA4CP-201ENST00000424092 1398 ntBASIC21.25■□□□□ 0.99
SRPK3Q9UPE1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRPK3Q9UPE1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRPK3Q9UPE1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRPK3Q9UPE1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRPK3Q9UPE1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRPK3Q9UPE1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SRPK3Q9UPE1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRPK3Q9UPE1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 AC104564.3-201ENST00000582367 638 ntBASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 AC144652.1-201ENST00000609974 1624 ntBASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SRPK3Q9UPE1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPK3Q9UPE1 DUX4L4-201ENST00000566884 1269 ntBASIC21.23■□□□□ 0.99
SRPK3Q9UPE1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.23■□□□□ 0.99
SRPK3Q9UPE1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
SRPK3Q9UPE1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPK3Q9UPE1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPK3Q9UPE1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 LINC01529-204ENST00000636474 1715 ntBASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 BX842568.3-201ENST00000418104 571 ntBASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRPK3Q9UPE1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.21■□□□□ 0.99
SRPK3Q9UPE1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SRPK3Q9UPE1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms