Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.74■□□□□ 0.75
ZCCHC4Q9H5U6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZCCHC4Q9H5U6 U85056.1-201ENST00000616429 682 ntBASIC19.74■□□□□ 0.75
ZCCHC4Q9H5U6 AC129492.7-201ENST00000622992 756 ntBASIC19.74■□□□□ 0.75
ZCCHC4Q9H5U6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZCCHC4Q9H5U6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ZCCHC4Q9H5U6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZCCHC4Q9H5U6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.73■□□□□ 0.75
ZCCHC4Q9H5U6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZCCHC4Q9H5U6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.73■□□□□ 0.75
ZCCHC4Q9H5U6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZCCHC4Q9H5U6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZCCHC4Q9H5U6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZCCHC4Q9H5U6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
ZCCHC4Q9H5U6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 AC011551.1-201ENST00000614101 683 ntBASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZCCHC4Q9H5U6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 AC007375.3-201ENST00000600936 2314 ntBASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZCCHC4Q9H5U6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZCCHC4Q9H5U6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZCCHC4Q9H5U6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
ZCCHC4Q9H5U6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ZCCHC4Q9H5U6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ZCCHC4Q9H5U6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZCCHC4Q9H5U6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZCCHC4Q9H5U6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.7■□□□□ 0.74
ZCCHC4Q9H5U6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.69■□□□□ 0.74
ZCCHC4Q9H5U6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZCCHC4Q9H5U6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZCCHC4Q9H5U6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZCCHC4Q9H5U6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZCCHC4Q9H5U6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZCCHC4Q9H5U6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZCCHC4Q9H5U6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 HSD17B1P1-201ENST00000590052 955 ntBASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC4Q9H5U6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 KRT18P60-201ENST00000312876 1297 ntBASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.67■□□□□ 0.74
ZCCHC4Q9H5U6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZCCHC4Q9H5U6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.66■□□□□ 0.74
ZCCHC4Q9H5U6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.66■□□□□ 0.74
ZCCHC4Q9H5U6 AC022616.5-201ENST00000518796 181 ntBASIC19.66■□□□□ 0.74
ZCCHC4Q9H5U6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZCCHC4Q9H5U6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZCCHC4Q9H5U6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms