Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 AC142472.1-201ENST00000612013 1741 ntBASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CYSTM1Q9H1C7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC13.27□□□□□ -0.28
CYSTM1Q9H1C7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CYSTM1Q9H1C7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CYSTM1Q9H1C7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CYSTM1Q9H1C7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CYSTM1Q9H1C7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC13.27□□□□□ -0.28
CYSTM1Q9H1C7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CYSTM1Q9H1C7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CYSTM1Q9H1C7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CYSTM1Q9H1C7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
CYSTM1Q9H1C7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC13.27□□□□□ -0.29
CYSTM1Q9H1C7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CYSTM1Q9H1C7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CYSTM1Q9H1C7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC13.27□□□□□ -0.29
CYSTM1Q9H1C7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CYSTM1Q9H1C7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CYSTM1Q9H1C7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CYSTM1Q9H1C7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 FZD10-202ENST00000539839 3282 ntBASIC13.26□□□□□ -0.29
CYSTM1Q9H1C7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.25□□□□□ -0.29
CYSTM1Q9H1C7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 AC106820.2-201ENST00000563775 3264 ntBASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
CYSTM1Q9H1C7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 C11orf96-202ENST00000528572 1834 ntBASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYSTM1Q9H1C7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms