Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 LINC00526-201ENST00000581067 1875 ntBASIC19.24■□□□□ 0.67
NICN1Q9BSH3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 AC011551.1-201ENST00000614101 683 ntBASIC19.24■□□□□ 0.67
NICN1Q9BSH3 U85056.1-201ENST00000616429 682 ntBASIC19.24■□□□□ 0.67
NICN1Q9BSH3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NICN1Q9BSH3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 AC129492.7-201ENST00000622992 756 ntBASIC19.23■□□□□ 0.67
NICN1Q9BSH3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NICN1Q9BSH3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NICN1Q9BSH3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 RARRES2P2-201ENST00000394842 485 ntBASIC19.21■□□□□ 0.67
NICN1Q9BSH3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.21■□□□□ 0.67
NICN1Q9BSH3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
NICN1Q9BSH3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NICN1Q9BSH3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NICN1Q9BSH3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NICN1Q9BSH3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NICN1Q9BSH3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NICN1Q9BSH3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NICN1Q9BSH3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.19■□□□□ 0.66
NICN1Q9BSH3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NICN1Q9BSH3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.18■□□□□ 0.66
NICN1Q9BSH3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms