Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DUX3Q96PT4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.42■□□□□ 0.38
DUX3Q96PT4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX3Q96PT4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX3Q96PT4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX3Q96PT4 DUX4L19-201ENST00000557448 1267 ntBASIC17.42■□□□□ 0.38
DUX3Q96PT4 AL031432.3-201ENST00000607698 485 ntBASIC17.42■□□□□ 0.38
DUX3Q96PT4 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.42■□□□□ 0.38
DUX3Q96PT4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX3Q96PT4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DUX3Q96PT4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
DUX3Q96PT4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX3Q96PT4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX3Q96PT4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX3Q96PT4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DUX3Q96PT4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.41■□□□□ 0.38
DUX3Q96PT4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.41■□□□□ 0.38
DUX3Q96PT4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUX3Q96PT4 LINC01124-201ENST00000409786 2117 ntBASIC17.41■□□□□ 0.38
DUX3Q96PT4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX3Q96PT4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX3Q96PT4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.41■□□□□ 0.38
DUX3Q96PT4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUX3Q96PT4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
DUX3Q96PT4 MIR4767-201ENST00000582827 78 ntBASIC17.41■□□□□ 0.38
DUX3Q96PT4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
DUX3Q96PT4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.41■□□□□ 0.38
DUX3Q96PT4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX3Q96PT4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.4■□□□□ 0.38
DUX3Q96PT4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX3Q96PT4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX3Q96PT4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX3Q96PT4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DUX3Q96PT4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.4■□□□□ 0.38
DUX3Q96PT4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.4■□□□□ 0.38
DUX3Q96PT4 ZNRF2P3-201ENST00000424200 374 ntBASIC17.4■□□□□ 0.38
DUX3Q96PT4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.4■□□□□ 0.38
DUX3Q96PT4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.4■□□□□ 0.38
DUX3Q96PT4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
DUX3Q96PT4 AF213884.3-201ENST00000563833 479 ntBASIC17.4■□□□□ 0.38
DUX3Q96PT4 AC092171.4-201ENST00000609130 632 ntBASIC17.4■□□□□ 0.38
DUX3Q96PT4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX3Q96PT4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX3Q96PT4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DUX3Q96PT4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.39■□□□□ 0.37
DUX3Q96PT4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUX3Q96PT4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.39■□□□□ 0.37
DUX3Q96PT4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.39■□□□□ 0.37
DUX3Q96PT4 AL355001.2-201ENST00000620617 1191 ntBASIC17.39■□□□□ 0.37
DUX3Q96PT4 AC009086.3-201ENST00000623486 1008 ntBASIC17.39■□□□□ 0.37
DUX3Q96PT4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX3Q96PT4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
DUX3Q96PT4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
DUX3Q96PT4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX3Q96PT4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUX3Q96PT4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUX3Q96PT4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX3Q96PT4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUX3Q96PT4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUX3Q96PT4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.38■□□□□ 0.37
DUX3Q96PT4 SUDS3P1-201ENST00000505831 966 ntBASIC17.38■□□□□ 0.37
DUX3Q96PT4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.38■□□□□ 0.37
DUX3Q96PT4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DUX3Q96PT4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUX3Q96PT4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DUX3Q96PT4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUX3Q96PT4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUX3Q96PT4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.38■□□□□ 0.37
DUX3Q96PT4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DUX3Q96PT4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.37■□□□□ 0.37
DUX3Q96PT4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUX3Q96PT4 EDA-201ENST00000338901 1233 ntBASIC17.37■□□□□ 0.37
DUX3Q96PT4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUX3Q96PT4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUX3Q96PT4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.37■□□□□ 0.37
DUX3Q96PT4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DUX3Q96PT4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.37■□□□□ 0.37
DUX3Q96PT4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUX3Q96PT4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.37■□□□□ 0.37
DUX3Q96PT4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
DUX3Q96PT4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
DUX3Q96PT4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.36■□□□□ 0.37
DUX3Q96PT4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX3Q96PT4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.36■□□□□ 0.37
DUX3Q96PT4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.36■□□□□ 0.37
DUX3Q96PT4 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.36■□□□□ 0.37
DUX3Q96PT4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX3Q96PT4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX3Q96PT4 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.35■□□□□ 0.37
DUX3Q96PT4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DUX3Q96PT4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DUX3Q96PT4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
DUX3Q96PT4 AP001330.3-201ENST00000520123 633 ntBASIC17.35■□□□□ 0.37
DUX3Q96PT4 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.35■□□□□ 0.37
DUX3Q96PT4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DUX3Q96PT4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.35■□□□□ 0.37
DUX3Q96PT4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.35■□□□□ 0.37
DUX3Q96PT4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX3Q96PT4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX3Q96PT4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms