Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 AL121603.2-201ENST00000557373 2117 ntBASIC16.88■□□□□ 0.29
AP1S3Q96PC3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S3Q96PC3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 HLA-L-211ENST00000482052 1765 ntBASIC16.87■□□□□ 0.29
AP1S3Q96PC3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S3Q96PC3 SMPD5-203ENST00000639008 1464 ntBASIC16.86■□□□□ 0.29
AP1S3Q96PC3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 MIR3648-2-201ENST00000581792 180 ntBASIC16.86■□□□□ 0.29
AP1S3Q96PC3 MIR3648-1-201ENST00000615959 180 ntBASIC16.86■□□□□ 0.29
AP1S3Q96PC3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S3Q96PC3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
AP1S3Q96PC3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 AC060814.1-201ENST00000554326 538 ntBASIC16.84■□□□□ 0.29
AP1S3Q96PC3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S3Q96PC3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms