Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
FOXRED1Q96CU9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
FOXRED1Q96CU9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXRED1Q96CU9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
FOXRED1Q96CU9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXRED1Q96CU9 LONRF2P2-201ENST00000439212 571 ntBASIC19.49■□□□□ 0.71
FOXRED1Q96CU9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXRED1Q96CU9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXRED1Q96CU9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 AC139795.1-202ENST00000500444 432 ntBASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 DUX4L18-201ENST00000553347 1267 ntBASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXRED1Q96CU9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXRED1Q96CU9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 AC131274.2-201ENST00000580697 1507 ntBASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 AC074183.2-201ENST00000623112 922 ntBASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 LINC00565-201ENST00000562710 2331 ntBASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXRED1Q96CU9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXRED1Q96CU9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 BHLHE23-202ENST00000612929 1109 ntBASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXRED1Q96CU9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXRED1Q96CU9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXRED1Q96CU9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXRED1Q96CU9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXRED1Q96CU9 AC022616.5-201ENST00000518796 181 ntBASIC19.43■□□□□ 0.7
FOXRED1Q96CU9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXRED1Q96CU9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXRED1Q96CU9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXRED1Q96CU9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
FOXRED1Q96CU9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms