Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 PKD1P6-201ENST00000343738 4769 ntBASIC14.31□□□□□ -0.12
SVIPQ8NHG7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SVIPQ8NHG7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SVIPQ8NHG7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 DRD5P2-201ENST00000421395 2012 ntBASIC14.29□□□□□ -0.12
SVIPQ8NHG7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.29□□□□□ -0.12
SVIPQ8NHG7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SVIPQ8NHG7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SVIPQ8NHG7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.27□□□□□ -0.12
SVIPQ8NHG7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SVIPQ8NHG7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SVIPQ8NHG7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SVIPQ8NHG7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SVIPQ8NHG7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SVIPQ8NHG7 AC068418.2-201ENST00000577309 3703 ntBASIC14.27□□□□□ -0.12
SVIPQ8NHG7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SVIPQ8NHG7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SVIPQ8NHG7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SVIPQ8NHG7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SVIPQ8NHG7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms