Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.05■□□□□ 0.96
NUP43Q8NFH3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUP43Q8NFH3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NUP43Q8NFH3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NUP43Q8NFH3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NUP43Q8NFH3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.05■□□□□ 0.96
NUP43Q8NFH3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NUP43Q8NFH3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NUP43Q8NFH3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
NUP43Q8NFH3 AC133561.1-201ENST00000568600 2415 ntBASIC21.04■□□□□ 0.96
NUP43Q8NFH3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUP43Q8NFH3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.04■□□□□ 0.96
NUP43Q8NFH3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.04■□□□□ 0.96
NUP43Q8NFH3 MTDHP2-201ENST00000601468 714 ntBASIC21.04■□□□□ 0.96
NUP43Q8NFH3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NUP43Q8NFH3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
NUP43Q8NFH3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.04■□□□□ 0.96
NUP43Q8NFH3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.03■□□□□ 0.96
NUP43Q8NFH3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.03■□□□□ 0.96
NUP43Q8NFH3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUP43Q8NFH3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
NUP43Q8NFH3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUP43Q8NFH3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUP43Q8NFH3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NUP43Q8NFH3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.03■□□□□ 0.96
NUP43Q8NFH3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
NUP43Q8NFH3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NUP43Q8NFH3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
NUP43Q8NFH3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NUP43Q8NFH3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NUP43Q8NFH3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUP43Q8NFH3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.02■□□□□ 0.96
NUP43Q8NFH3 TSPY9P-201ENST00000440215 945 ntBASIC21.02■□□□□ 0.96
NUP43Q8NFH3 TSPY11P-201ENST00000442607 1045 ntBASIC21.02■□□□□ 0.96
NUP43Q8NFH3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NUP43Q8NFH3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NUP43Q8NFH3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUP43Q8NFH3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NUP43Q8NFH3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NUP43Q8NFH3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUP43Q8NFH3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21■□□□□ 0.95
NUP43Q8NFH3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NUP43Q8NFH3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NUP43Q8NFH3 AC012676.1-201ENST00000574705 1949 ntBASIC21■□□□□ 0.95
NUP43Q8NFH3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21■□□□□ 0.95
NUP43Q8NFH3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NUP43Q8NFH3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUP43Q8NFH3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21■□□□□ 0.95
NUP43Q8NFH3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUP43Q8NFH3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUP43Q8NFH3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21■□□□□ 0.95
NUP43Q8NFH3 AC010997.5-201ENST00000609182 354 ntBASIC21■□□□□ 0.95
NUP43Q8NFH3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NUP43Q8NFH3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21■□□□□ 0.95
NUP43Q8NFH3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUP43Q8NFH3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUP43Q8NFH3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.99■□□□□ 0.95
NUP43Q8NFH3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUP43Q8NFH3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUP43Q8NFH3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUP43Q8NFH3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUP43Q8NFH3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP43Q8NFH3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.97■□□□□ 0.95
NUP43Q8NFH3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUP43Q8NFH3 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.97■□□□□ 0.95
NUP43Q8NFH3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NUP43Q8NFH3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP43Q8NFH3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.97■□□□□ 0.95
NUP43Q8NFH3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP43Q8NFH3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP43Q8NFH3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 AL035685.1-201ENST00000636663 812 ntBASIC20.96■□□□□ 0.95
NUP43Q8NFH3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms