Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PNMA1Q8ND90 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.27■■□□□ 1.8
PNMA1Q8ND90 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.26■■□□□ 1.79
PNMA1Q8ND90 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PNMA1Q8ND90 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PNMA1Q8ND90 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PNMA1Q8ND90 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PNMA1Q8ND90 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PNMA1Q8ND90 AC006455.2-201ENST00000429931 906 ntBASIC26.26■■□□□ 1.79
PNMA1Q8ND90 DUX4L19-201ENST00000557448 1267 ntBASIC26.26■■□□□ 1.79
PNMA1Q8ND90 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
PNMA1Q8ND90 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PNMA1Q8ND90 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PNMA1Q8ND90 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PNMA1Q8ND90 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PNMA1Q8ND90 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PNMA1Q8ND90 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.25■■□□□ 1.79
PNMA1Q8ND90 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.25■■□□□ 1.79
PNMA1Q8ND90 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PNMA1Q8ND90 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PNMA1Q8ND90 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PNMA1Q8ND90 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PNMA1Q8ND90 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PNMA1Q8ND90 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PNMA1Q8ND90 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.24■■□□□ 1.79
PNMA1Q8ND90 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PNMA1Q8ND90 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PNMA1Q8ND90 AC009086.3-201ENST00000623486 1008 ntBASIC26.24■■□□□ 1.79
PNMA1Q8ND90 SYT6-210ENST00000641643 1587 ntBASIC26.24■■□□□ 1.79
PNMA1Q8ND90 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PNMA1Q8ND90 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PNMA1Q8ND90 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PNMA1Q8ND90 AL136162.1-201ENST00000607711 1078 ntBASIC26.23■■□□□ 1.79
PNMA1Q8ND90 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PNMA1Q8ND90 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
PNMA1Q8ND90 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PNMA1Q8ND90 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 AC144652.1-201ENST00000609974 1624 ntBASIC26.22■■□□□ 1.79
PNMA1Q8ND90 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 SERBP1P1-201ENST00000396021 1160 ntBASIC26.22■■□□□ 1.79
PNMA1Q8ND90 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.22■■□□□ 1.79
PNMA1Q8ND90 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PNMA1Q8ND90 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PNMA1Q8ND90 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PNMA1Q8ND90 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.21■■□□□ 1.79
PNMA1Q8ND90 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.21■■□□□ 1.79
PNMA1Q8ND90 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PNMA1Q8ND90 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.21■■□□□ 1.79
PNMA1Q8ND90 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
PNMA1Q8ND90 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PNMA1Q8ND90 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PNMA1Q8ND90 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PNMA1Q8ND90 AC079630.1-202ENST00000618127 1840 ntBASIC26.21■■□□□ 1.79
PNMA1Q8ND90 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.2■■□□□ 1.78
PNMA1Q8ND90 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
PNMA1Q8ND90 PBX2P1-201ENST00000493219 1291 ntBASIC26.2■■□□□ 1.78
PNMA1Q8ND90 AC024257.2-201ENST00000549699 147 ntBASIC26.2■■□□□ 1.78
PNMA1Q8ND90 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.2■■□□□ 1.78
PNMA1Q8ND90 AC106739.1-201ENST00000617035 715 ntBASIC26.2■■□□□ 1.78
PNMA1Q8ND90 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PNMA1Q8ND90 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PNMA1Q8ND90 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PNMA1Q8ND90 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 AC135279.3-201ENST00000610945 1311 ntBASIC26.19■■□□□ 1.78
PNMA1Q8ND90 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 MIR638-201ENST00000385237 100 ntBASIC26.19■■□□□ 1.78
PNMA1Q8ND90 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PNMA1Q8ND90 FP325331.1-202ENST00000623531 1380 ntBASIC26.19■■□□□ 1.78
PNMA1Q8ND90 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.19■■□□□ 1.78
PNMA1Q8ND90 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.18■■□□□ 1.78
PNMA1Q8ND90 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms