Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
RETREG2Q8NC44 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RETREG2Q8NC44 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RETREG2Q8NC44 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RETREG2Q8NC44 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RETREG2Q8NC44 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.46■■□□□ 1.67
RETREG2Q8NC44 AC091305.1-201ENST00000479476 895 ntBASIC25.46■■□□□ 1.67
RETREG2Q8NC44 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RETREG2Q8NC44 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
RETREG2Q8NC44 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RETREG2Q8NC44 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RETREG2Q8NC44 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RETREG2Q8NC44 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.45■■□□□ 1.66
RETREG2Q8NC44 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.45■■□□□ 1.66
RETREG2Q8NC44 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.45■■□□□ 1.66
RETREG2Q8NC44 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RETREG2Q8NC44 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RETREG2Q8NC44 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RETREG2Q8NC44 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RETREG2Q8NC44 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RETREG2Q8NC44 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RETREG2Q8NC44 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.44■■□□□ 1.66
RETREG2Q8NC44 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.44■■□□□ 1.66
RETREG2Q8NC44 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.44■■□□□ 1.66
RETREG2Q8NC44 HLA-L-211ENST00000482052 1765 ntBASIC25.44■■□□□ 1.66
RETREG2Q8NC44 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RETREG2Q8NC44 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.43■■□□□ 1.66
RETREG2Q8NC44 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.43■■□□□ 1.66
RETREG2Q8NC44 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RETREG2Q8NC44 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
RETREG2Q8NC44 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.43■■□□□ 1.66
RETREG2Q8NC44 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.43■■□□□ 1.66
RETREG2Q8NC44 AL161729.1-201ENST00000604104 1402 ntBASIC25.43■■□□□ 1.66
RETREG2Q8NC44 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RETREG2Q8NC44 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RETREG2Q8NC44 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.42■■□□□ 1.66
RETREG2Q8NC44 MIR4767-201ENST00000582827 78 ntBASIC25.42■■□□□ 1.66
RETREG2Q8NC44 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
RETREG2Q8NC44 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RETREG2Q8NC44 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RETREG2Q8NC44 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
RETREG2Q8NC44 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RETREG2Q8NC44 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.41■■□□□ 1.66
RETREG2Q8NC44 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.41■■□□□ 1.66
RETREG2Q8NC44 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.41■■□□□ 1.66
RETREG2Q8NC44 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
RETREG2Q8NC44 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.41■■□□□ 1.66
RETREG2Q8NC44 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RETREG2Q8NC44 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.41■■□□□ 1.66
RETREG2Q8NC44 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
RETREG2Q8NC44 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RETREG2Q8NC44 MIR6821-201ENST00000617625 74 ntBASIC25.4■■□□□ 1.66
RETREG2Q8NC44 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.4■■□□□ 1.66
RETREG2Q8NC44 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RETREG2Q8NC44 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.39■■□□□ 1.66
RETREG2Q8NC44 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
RETREG2Q8NC44 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
RETREG2Q8NC44 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RETREG2Q8NC44 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RETREG2Q8NC44 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RETREG2Q8NC44 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.39■■□□□ 1.66
RETREG2Q8NC44 CA15P2-201ENST00000611168 834 ntBASIC25.39■■□□□ 1.66
RETREG2Q8NC44 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.39■■□□□ 1.65
RETREG2Q8NC44 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.39■■□□□ 1.65
RETREG2Q8NC44 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
RETREG2Q8NC44 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.65
RETREG2Q8NC44 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
RETREG2Q8NC44 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETREG2Q8NC44 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RETREG2Q8NC44 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RETREG2Q8NC44 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETREG2Q8NC44 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.38■■□□□ 1.65
RETREG2Q8NC44 SERBP1P1-201ENST00000396021 1160 ntBASIC25.38■■□□□ 1.65
RETREG2Q8NC44 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETREG2Q8NC44 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.38■■□□□ 1.65
RETREG2Q8NC44 RASA4CP-201ENST00000424092 1398 ntBASIC25.38■■□□□ 1.65
RETREG2Q8NC44 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETREG2Q8NC44 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.38■■□□□ 1.65
RETREG2Q8NC44 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
RETREG2Q8NC44 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RETREG2Q8NC44 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
RETREG2Q8NC44 AC012676.1-201ENST00000574705 1949 ntBASIC25.37■■□□□ 1.65
RETREG2Q8NC44 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
RETREG2Q8NC44 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RETREG2Q8NC44 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.37■■□□□ 1.65
RETREG2Q8NC44 AC099791.2-201ENST00000605725 427 ntBASIC25.37■■□□□ 1.65
RETREG2Q8NC44 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RETREG2Q8NC44 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 AC097381.1-201ENST00000429019 1296 ntBASIC25.36■■□□□ 1.65
RETREG2Q8NC44 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RETREG2Q8NC44 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms