Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH20Q8N6Y1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 AC096631.2-201ENST00000436136 790 ntBASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 AL139246.5-201ENST00000606645 996 ntBASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 AC092171.4-201ENST00000609130 632 ntBASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH20Q8N6Y1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH20Q8N6Y1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDH20Q8N6Y1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH20Q8N6Y1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.91■■□□□ 1.26
PCDH20Q8N6Y1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
PCDH20Q8N6Y1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDH20Q8N6Y1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH20Q8N6Y1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH20Q8N6Y1 AC004812.2-201ENST00000611079 2094 ntBASIC22.9■■□□□ 1.26
PCDH20Q8N6Y1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH20Q8N6Y1 AC110285.6-201ENST00000617652 491 ntBASIC22.9■■□□□ 1.26
PCDH20Q8N6Y1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH20Q8N6Y1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.9■■□□□ 1.26
PCDH20Q8N6Y1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH20Q8N6Y1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH20Q8N6Y1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH20Q8N6Y1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH20Q8N6Y1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
PCDH20Q8N6Y1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
PCDH20Q8N6Y1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH20Q8N6Y1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH20Q8N6Y1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.89■■□□□ 1.25
PCDH20Q8N6Y1 DUX4L19-201ENST00000557448 1267 ntBASIC22.89■■□□□ 1.25
PCDH20Q8N6Y1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDH20Q8N6Y1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH20Q8N6Y1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH20Q8N6Y1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH20Q8N6Y1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH20Q8N6Y1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH20Q8N6Y1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 AC241377.3-202ENST00000626088 1088 ntBASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 AC241585.3-202ENST00000628937 1088 ntBASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 AC245100.8-202ENST00000629247 1058 ntBASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH20Q8N6Y1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH20Q8N6Y1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.87■■□□□ 1.25
PCDH20Q8N6Y1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH20Q8N6Y1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDH20Q8N6Y1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH20Q8N6Y1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH20Q8N6Y1 UNC93B3-201ENST00000308076 687 ntBASIC22.86■■□□□ 1.25
PCDH20Q8N6Y1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.86■■□□□ 1.25
PCDH20Q8N6Y1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH20Q8N6Y1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDH20Q8N6Y1 AC099791.2-201ENST00000605725 427 ntBASIC22.86■■□□□ 1.25
PCDH20Q8N6Y1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDH20Q8N6Y1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH20Q8N6Y1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH20Q8N6Y1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH20Q8N6Y1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH20Q8N6Y1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
PCDH20Q8N6Y1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
PCDH20Q8N6Y1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH20Q8N6Y1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDH20Q8N6Y1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDH20Q8N6Y1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH20Q8N6Y1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH20Q8N6Y1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH20Q8N6Y1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms