Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC146Q8IYE0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC146Q8IYE0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC29.9■■■□□ 2.38
CCDC146Q8IYE0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC146Q8IYE0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC146Q8IYE0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC146Q8IYE0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC146Q8IYE0 AC079630.1-202ENST00000618127 1840 ntBASIC29.89■■■□□ 2.38
CCDC146Q8IYE0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
CCDC146Q8IYE0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CCDC146Q8IYE0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.89■■■□□ 2.38
CCDC146Q8IYE0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC29.89■■■□□ 2.37
CCDC146Q8IYE0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC146Q8IYE0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.88■■■□□ 2.37
CCDC146Q8IYE0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC146Q8IYE0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.88■■■□□ 2.37
CCDC146Q8IYE0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC29.88■■■□□ 2.37
CCDC146Q8IYE0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC146Q8IYE0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC146Q8IYE0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC146Q8IYE0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC146Q8IYE0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC146Q8IYE0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC146Q8IYE0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
CCDC146Q8IYE0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC146Q8IYE0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC146Q8IYE0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC146Q8IYE0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
CCDC146Q8IYE0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC146Q8IYE0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC146Q8IYE0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC29.86■■■□□ 2.37
CCDC146Q8IYE0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC146Q8IYE0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC146Q8IYE0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC146Q8IYE0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC146Q8IYE0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC146Q8IYE0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC146Q8IYE0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.85■■■□□ 2.37
CCDC146Q8IYE0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC146Q8IYE0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.85■■■□□ 2.37
CCDC146Q8IYE0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC146Q8IYE0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC146Q8IYE0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC146Q8IYE0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC146Q8IYE0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
CCDC146Q8IYE0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC146Q8IYE0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC146Q8IYE0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC146Q8IYE0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC146Q8IYE0 C17orf82-201ENST00000623772 1530 ntBASIC29.83■■■□□ 2.37
CCDC146Q8IYE0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC146Q8IYE0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC29.83■■■□□ 2.37
CCDC146Q8IYE0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC146Q8IYE0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC29.83■■■□□ 2.37
CCDC146Q8IYE0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC146Q8IYE0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC146Q8IYE0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC29.81■■■□□ 2.36
CCDC146Q8IYE0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC29.81■■■□□ 2.36
CCDC146Q8IYE0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC146Q8IYE0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC29.81■■■□□ 2.36
CCDC146Q8IYE0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC146Q8IYE0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC146Q8IYE0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC146Q8IYE0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC146Q8IYE0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC146Q8IYE0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC146Q8IYE0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
CCDC146Q8IYE0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC146Q8IYE0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC146Q8IYE0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.79■■■□□ 2.36
CCDC146Q8IYE0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC146Q8IYE0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC146Q8IYE0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC29.78■■■□□ 2.36
CCDC146Q8IYE0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC146Q8IYE0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
CCDC146Q8IYE0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC29.78■■■□□ 2.36
CCDC146Q8IYE0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms