Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRTM1Q86UE6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LRRTM1Q86UE6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRTM1Q86UE6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRTM1Q86UE6 LONRF2P2-201ENST00000439212 571 ntBASIC19.52■□□□□ 0.72
LRRTM1Q86UE6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRTM1Q86UE6 MIR4449-201ENST00000578365 66 ntBASIC19.52■□□□□ 0.72
LRRTM1Q86UE6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRTM1Q86UE6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRTM1Q86UE6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LRRTM1Q86UE6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRTM1Q86UE6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRTM1Q86UE6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 MIR6765-201ENST00000614092 87 ntBASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRRTM1Q86UE6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 AC011551.1-201ENST00000614101 683 ntBASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 AC079630.1-202ENST00000618127 1840 ntBASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRTM1Q86UE6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 DUX4L9-201ENST00000449051 1259 ntBASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 AC007375.3-201ENST00000600936 2314 ntBASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRTM1Q86UE6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 RNF126P1-201ENST00000567452 1320 ntBASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM1Q86UE6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM1Q86UE6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRTM1Q86UE6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM1Q86UE6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRRTM1Q86UE6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRRTM1Q86UE6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM1Q86UE6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRTM1Q86UE6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM1Q86UE6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM1Q86UE6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM1Q86UE6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LRRTM1Q86UE6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms