Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL4Q6ZR62 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.97■□□□□ 0.95
RTL4Q6ZR62 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.97■□□□□ 0.95
RTL4Q6ZR62 MIR4466-201ENST00000606121 54 ntBASIC20.97■□□□□ 0.95
RTL4Q6ZR62 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTL4Q6ZR62 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RTL4Q6ZR62 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL4Q6ZR62 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.97■□□□□ 0.95
RTL4Q6ZR62 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL4Q6ZR62 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RTL4Q6ZR62 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL4Q6ZR62 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL4Q6ZR62 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.96■□□□□ 0.95
RTL4Q6ZR62 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTL4Q6ZR62 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.96■□□□□ 0.95
RTL4Q6ZR62 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTL4Q6ZR62 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL4Q6ZR62 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL4Q6ZR62 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.94■□□□□ 0.94
RTL4Q6ZR62 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL4Q6ZR62 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.94■□□□□ 0.94
RTL4Q6ZR62 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RTL4Q6ZR62 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
RTL4Q6ZR62 AC012676.1-201ENST00000574705 1949 ntBASIC20.94■□□□□ 0.94
RTL4Q6ZR62 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RTL4Q6ZR62 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RTL4Q6ZR62 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RTL4Q6ZR62 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.93■□□□□ 0.94
RTL4Q6ZR62 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL4Q6ZR62 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.93■□□□□ 0.94
RTL4Q6ZR62 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL4Q6ZR62 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
RTL4Q6ZR62 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.93■□□□□ 0.94
RTL4Q6ZR62 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
RTL4Q6ZR62 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL4Q6ZR62 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTL4Q6ZR62 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTL4Q6ZR62 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL4Q6ZR62 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL4Q6ZR62 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RTL4Q6ZR62 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL4Q6ZR62 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL4Q6ZR62 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL4Q6ZR62 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL4Q6ZR62 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL4Q6ZR62 SRD5A1P1-201ENST00000442297 786 ntBASIC20.9■□□□□ 0.94
RTL4Q6ZR62 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.9■□□□□ 0.94
RTL4Q6ZR62 ALDH1A3-203ENST00000557963 1670 ntBASIC20.89■□□□□ 0.94
RTL4Q6ZR62 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RTL4Q6ZR62 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTL4Q6ZR62 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTL4Q6ZR62 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.89■□□□□ 0.93
RTL4Q6ZR62 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTL4Q6ZR62 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
RTL4Q6ZR62 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL4Q6ZR62 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL4Q6ZR62 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.89■□□□□ 0.93
RTL4Q6ZR62 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RTL4Q6ZR62 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL4Q6ZR62 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL4Q6ZR62 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL4Q6ZR62 DUSP8P5-201ENST00000422884 1815 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms