Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.96■□□□□ 0.31
MRPL54Q6P161 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL54Q6P161 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL54Q6P161 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL54Q6P161 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL54Q6P161 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.96■□□□□ 0.3
MRPL54Q6P161 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.96■□□□□ 0.3
MRPL54Q6P161 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MRPL54Q6P161 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MRPL54Q6P161 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.95■□□□□ 0.3
MRPL54Q6P161 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MRPL54Q6P161 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MRPL54Q6P161 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.95■□□□□ 0.3
MRPL54Q6P161 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.95■□□□□ 0.3
MRPL54Q6P161 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.95■□□□□ 0.3
MRPL54Q6P161 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MRPL54Q6P161 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MRPL54Q6P161 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
MRPL54Q6P161 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.95■□□□□ 0.3
MRPL54Q6P161 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
MRPL54Q6P161 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPL54Q6P161 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MRPL54Q6P161 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MRPL54Q6P161 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MRPL54Q6P161 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
MRPL54Q6P161 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPL54Q6P161 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPL54Q6P161 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPL54Q6P161 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPL54Q6P161 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MRPL54Q6P161 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.93■□□□□ 0.3
MRPL54Q6P161 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.93■□□□□ 0.3
MRPL54Q6P161 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPL54Q6P161 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPL54Q6P161 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.93■□□□□ 0.3
MRPL54Q6P161 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPL54Q6P161 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPL54Q6P161 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MRPL54Q6P161 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
MRPL54Q6P161 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.93■□□□□ 0.3
MRPL54Q6P161 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MRPL54Q6P161 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MRPL54Q6P161 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPL54Q6P161 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPL54Q6P161 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPL54Q6P161 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPL54Q6P161 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MRPL54Q6P161 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.92■□□□□ 0.3
MRPL54Q6P161 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPL54Q6P161 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPL54Q6P161 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.92■□□□□ 0.3
MRPL54Q6P161 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPL54Q6P161 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPL54Q6P161 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.92■□□□□ 0.3
MRPL54Q6P161 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MRPL54Q6P161 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MRPL54Q6P161 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.91■□□□□ 0.3
MRPL54Q6P161 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.91■□□□□ 0.3
MRPL54Q6P161 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.91■□□□□ 0.3
MRPL54Q6P161 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.91■□□□□ 0.3
MRPL54Q6P161 AC021231.2-201ENST00000594613 730 ntBASIC16.91■□□□□ 0.3
MRPL54Q6P161 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
MRPL54Q6P161 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
MRPL54Q6P161 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL54Q6P161 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.9■□□□□ 0.3
MRPL54Q6P161 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRPL54Q6P161 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRPL54Q6P161 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRPL54Q6P161 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.9■□□□□ 0.3
MRPL54Q6P161 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRPL54Q6P161 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRPL54Q6P161 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRPL54Q6P161 FBXW4P1-201ENST00000426721 2239 ntBASIC16.9■□□□□ 0.3
MRPL54Q6P161 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRPL54Q6P161 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
MRPL54Q6P161 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.89■□□□□ 0.3
MRPL54Q6P161 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL54Q6P161 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MRPL54Q6P161 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL54Q6P161 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.89■□□□□ 0.29
MRPL54Q6P161 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL54Q6P161 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.89■□□□□ 0.29
MRPL54Q6P161 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.89■□□□□ 0.29
MRPL54Q6P161 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL54Q6P161 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.89■□□□□ 0.29
MRPL54Q6P161 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
MRPL54Q6P161 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MRPL54Q6P161 ESRRAP2-201ENST00000418437 1549 ntBASIC16.89■□□□□ 0.29
MRPL54Q6P161 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms