Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D28Q2M2D7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D28Q2M2D7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.52■□□□□ 0.72
TBC1D28Q2M2D7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.52■□□□□ 0.72
TBC1D28Q2M2D7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TBC1D28Q2M2D7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.52■□□□□ 0.72
TBC1D28Q2M2D7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D28Q2M2D7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D28Q2M2D7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D28Q2M2D7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D28Q2M2D7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D28Q2M2D7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D28Q2M2D7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TBC1D28Q2M2D7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TBC1D28Q2M2D7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TBC1D28Q2M2D7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TBC1D28Q2M2D7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D28Q2M2D7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TBC1D28Q2M2D7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TBC1D28Q2M2D7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.5■□□□□ 0.71
TBC1D28Q2M2D7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.5■□□□□ 0.71
TBC1D28Q2M2D7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TBC1D28Q2M2D7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TBC1D28Q2M2D7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TBC1D28Q2M2D7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TBC1D28Q2M2D7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TBC1D28Q2M2D7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TBC1D28Q2M2D7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.49■□□□□ 0.71
TBC1D28Q2M2D7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 AC131281.2-201ENST00000520478 145 ntBASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 AL512631.2-201ENST00000604634 923 ntBASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D28Q2M2D7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 C17orf82-201ENST00000623772 1530 ntBASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 ANOS2P-203ENST00000472227 1816 ntBASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 AC144652.1-201ENST00000609974 1624 ntBASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.47■□□□□ 0.71
TBC1D28Q2M2D7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D28Q2M2D7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.46■□□□□ 0.71
TBC1D28Q2M2D7 AC008406.3-201ENST00000620001 1374 ntBASIC19.46■□□□□ 0.71
TBC1D28Q2M2D7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.46■□□□□ 0.71
TBC1D28Q2M2D7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.46■□□□□ 0.71
TBC1D28Q2M2D7 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.46■□□□□ 0.71
TBC1D28Q2M2D7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D28Q2M2D7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D28Q2M2D7 AC079630.1-202ENST00000618127 1840 ntBASIC19.46■□□□□ 0.71
TBC1D28Q2M2D7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D28Q2M2D7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 AC241377.3-202ENST00000626088 1088 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms