Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PDS5AQ29RF7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDS5AQ29RF7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDS5AQ29RF7 BX842568.3-201ENST00000418104 571 ntBASIC27.24■■□□□ 1.95
PDS5AQ29RF7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.24■■□□□ 1.95
PDS5AQ29RF7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.24■■□□□ 1.95
PDS5AQ29RF7 DUX4L4-201ENST00000566884 1269 ntBASIC27.24■■□□□ 1.95
PDS5AQ29RF7 AL499627.2-201ENST00000606283 725 ntBASIC27.24■■□□□ 1.95
PDS5AQ29RF7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
PDS5AQ29RF7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDS5AQ29RF7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDS5AQ29RF7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDS5AQ29RF7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.23■■□□□ 1.95
PDS5AQ29RF7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.23■■□□□ 1.95
PDS5AQ29RF7 LINC01124-201ENST00000409786 2117 ntBASIC27.23■■□□□ 1.95
PDS5AQ29RF7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDS5AQ29RF7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.23■■□□□ 1.95
PDS5AQ29RF7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDS5AQ29RF7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
PDS5AQ29RF7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
PDS5AQ29RF7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC27.22■■□□□ 1.95
PDS5AQ29RF7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.22■■□□□ 1.95
PDS5AQ29RF7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.22■■□□□ 1.95
PDS5AQ29RF7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC27.22■■□□□ 1.95
PDS5AQ29RF7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PDS5AQ29RF7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
PDS5AQ29RF7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.22■■□□□ 1.95
PDS5AQ29RF7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.22■■□□□ 1.95
PDS5AQ29RF7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDS5AQ29RF7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PDS5AQ29RF7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.21■■□□□ 1.95
PDS5AQ29RF7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.21■■□□□ 1.95
PDS5AQ29RF7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PDS5AQ29RF7 AC233992.3-201ENST00000607491 485 ntBASIC27.21■■□□□ 1.95
PDS5AQ29RF7 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.21■■□□□ 1.95
PDS5AQ29RF7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDS5AQ29RF7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.2■■□□□ 1.95
PDS5AQ29RF7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.2■■□□□ 1.95
PDS5AQ29RF7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC27.2■■□□□ 1.95
PDS5AQ29RF7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
PDS5AQ29RF7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PDS5AQ29RF7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PDS5AQ29RF7 AC144652.1-201ENST00000609974 1624 ntBASIC27.2■■□□□ 1.94
PDS5AQ29RF7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
PDS5AQ29RF7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDS5AQ29RF7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDS5AQ29RF7 AC099791.1-201ENST00000416440 715 ntBASIC27.19■■□□□ 1.94
PDS5AQ29RF7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.19■■□□□ 1.94
PDS5AQ29RF7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PDS5AQ29RF7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDS5AQ29RF7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDS5AQ29RF7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PDS5AQ29RF7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PDS5AQ29RF7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PDS5AQ29RF7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PDS5AQ29RF7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
PDS5AQ29RF7 AC008764.7-201ENST00000593779 1081 ntBASIC27.18■■□□□ 1.94
PDS5AQ29RF7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC27.18■■□□□ 1.94
PDS5AQ29RF7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDS5AQ29RF7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PDS5AQ29RF7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
PDS5AQ29RF7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
PDS5AQ29RF7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PDS5AQ29RF7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 AC004812.2-201ENST00000611079 2094 ntBASIC27.16■■□□□ 1.94
PDS5AQ29RF7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC27.16■■□□□ 1.94
PDS5AQ29RF7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC27.15■■□□□ 1.94
PDS5AQ29RF7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
PDS5AQ29RF7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PDS5AQ29RF7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
PDS5AQ29RF7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.15■■□□□ 1.94
PDS5AQ29RF7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.14■■□□□ 1.94
PDS5AQ29RF7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PDS5AQ29RF7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
PDS5AQ29RF7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PDS5AQ29RF7 AC133637.1-201ENST00000624115 1537 ntBASIC27.14■■□□□ 1.93
PDS5AQ29RF7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PDS5AQ29RF7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PDS5AQ29RF7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
PDS5AQ29RF7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC27.14■■□□□ 1.93
PDS5AQ29RF7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC27.14■■□□□ 1.93
PDS5AQ29RF7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
PDS5AQ29RF7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDS5AQ29RF7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDS5AQ29RF7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDS5AQ29RF7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PDS5AQ29RF7 LINC01529-204ENST00000636474 1715 ntBASIC27.13■■□□□ 1.93
PDS5AQ29RF7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms