Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
CKS1BP61024 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CKS1BP61024 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CKS1BP61024 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CKS1BP61024 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CKS1BP61024 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CKS1BP61024 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CKS1BP61024 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.58■□□□□ 0.08
CKS1BP61024 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CKS1BP61024 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CKS1BP61024 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CKS1BP61024 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CKS1BP61024 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CKS1BP61024 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CKS1BP61024 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.57■□□□□ 0.08
CKS1BP61024 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CKS1BP61024 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CKS1BP61024 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC15.57■□□□□ 0.08
CKS1BP61024 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.57■□□□□ 0.08
CKS1BP61024 ABHD17AP4-201ENST00000411545 909 ntBASIC15.57■□□□□ 0.08
CKS1BP61024 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CKS1BP61024 AC025884.2-201ENST00000553429 711 ntBASIC15.57■□□□□ 0.08
CKS1BP61024 AC016575.1-201ENST00000607026 382 ntBASIC15.57■□□□□ 0.08
CKS1BP61024 MIR6089-201ENST00000616698 64 ntBASIC15.57■□□□□ 0.08
CKS1BP61024 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CKS1BP61024 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS1BP61024 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS1BP61024 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.57■□□□□ 0.08
CKS1BP61024 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS1BP61024 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CKS1BP61024 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS1BP61024 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS1BP61024 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.56■□□□□ 0.08
CKS1BP61024 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CKS1BP61024 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC15.56■□□□□ 0.08
CKS1BP61024 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CKS1BP61024 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKS1BP61024 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.56■□□□□ 0.08
CKS1BP61024 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.56■□□□□ 0.08
CKS1BP61024 AC073130.3-201ENST00000624389 2278 ntBASIC15.56■□□□□ 0.08
CKS1BP61024 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CKS1BP61024 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKS1BP61024 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKS1BP61024 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.55■□□□□ 0.08
CKS1BP61024 DUSP8P5-201ENST00000422884 1815 ntBASIC15.55■□□□□ 0.08
CKS1BP61024 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CKS1BP61024 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.55■□□□□ 0.08
CKS1BP61024 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKS1BP61024 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKS1BP61024 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKS1BP61024 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKS1BP61024 AC007375.3-201ENST00000600936 2314 ntBASIC15.55■□□□□ 0.08
CKS1BP61024 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKS1BP61024 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKS1BP61024 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKS1BP61024 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKS1BP61024 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.54■□□□□ 0.08
CKS1BP61024 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKS1BP61024 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKS1BP61024 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.54■□□□□ 0.08
CKS1BP61024 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKS1BP61024 KRT18P10-201ENST00000388836 1287 ntBASIC15.54■□□□□ 0.08
CKS1BP61024 AL157400.5-201ENST00000507624 621 ntBASIC15.54■□□□□ 0.08
CKS1BP61024 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.54■□□□□ 0.08
CKS1BP61024 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CKS1BP61024 MOB2-207ENST00000614710 705 ntTSL 5 BASIC15.54■□□□□ 0.08
CKS1BP61024 AC004812.2-201ENST00000611079 2094 ntBASIC15.54■□□□□ 0.08
CKS1BP61024 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKS1BP61024 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC15.54■□□□□ 0.08
CKS1BP61024 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKS1BP61024 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.54■□□□□ 0.08
CKS1BP61024 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.53■□□□□ 0.08
CKS1BP61024 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKS1BP61024 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKS1BP61024 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.53■□□□□ 0.08
CKS1BP61024 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.53■□□□□ 0.08
CKS1BP61024 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.53■□□□□ 0.08
CKS1BP61024 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.53■□□□□ 0.08
CKS1BP61024 AC060814.1-201ENST00000554326 538 ntBASIC15.53■□□□□ 0.08
CKS1BP61024 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKS1BP61024 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKS1BP61024 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKS1BP61024 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKS1BP61024 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.52■□□□□ 0.08
CKS1BP61024 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKS1BP61024 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.52■□□□□ 0.08
CKS1BP61024 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
CKS1BP61024 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKS1BP61024 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CKS1BP61024 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms