Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB5BP61020 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5BP61020 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAB5BP61020 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB5BP61020 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5BP61020 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RAB5BP61020 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5BP61020 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAB5BP61020 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5BP61020 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5BP61020 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5BP61020 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB5BP61020 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5BP61020 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5BP61020 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB5BP61020 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5BP61020 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5BP61020 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RAB5BP61020 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5BP61020 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5BP61020 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB5BP61020 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5BP61020 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RAB5BP61020 SLC6A10P-202ENST00000431994 2058 ntBASIC17.67■□□□□ 0.42
RAB5BP61020 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB5BP61020 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5BP61020 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RAB5BP61020 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB5BP61020 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB5BP61020 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5BP61020 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5BP61020 FBXW4P1-201ENST00000426721 2239 ntBASIC17.66■□□□□ 0.42
RAB5BP61020 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB5BP61020 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5BP61020 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5BP61020 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5BP61020 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5BP61020 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB5BP61020 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB5BP61020 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5BP61020 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5BP61020 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5BP61020 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5BP61020 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5BP61020 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAB5BP61020 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5BP61020 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5BP61020 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RAB5BP61020 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB5BP61020 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5BP61020 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5BP61020 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAB5BP61020 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB5BP61020 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB5BP61020 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB5BP61020 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5BP61020 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5BP61020 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5BP61020 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB5BP61020 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB5BP61020 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5BP61020 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB5BP61020 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB5BP61020 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5BP61020 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5BP61020 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5BP61020 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5BP61020 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5BP61020 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5BP61020 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB5BP61020 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5BP61020 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5BP61020 AC026310.3-201ENST00000625186 2373 ntBASIC17.63■□□□□ 0.41
RAB5BP61020 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5BP61020 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5BP61020 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5BP61020 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5BP61020 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB5BP61020 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5BP61020 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB5BP61020 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5BP61020 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RAB5BP61020 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB5BP61020 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5BP61020 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5BP61020 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5BP61020 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5BP61020 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5BP61020 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5BP61020 AL031258.1-201ENST00000623562 325 ntBASIC17.61■□□□□ 0.41
RAB5BP61020 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB5BP61020 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB5BP61020 LINC01521-201ENST00000504184 1943 ntBASIC17.6■□□□□ 0.41
RAB5BP61020 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5BP61020 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RAB5BP61020 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5BP61020 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5BP61020 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5BP61020 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5BP61020 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms