Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXG1P55316 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
FOXG1P55316 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXG1P55316 AC096631.2-201ENST00000436136 790 ntBASIC19.79■□□□□ 0.76
FOXG1P55316 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.79■□□□□ 0.76
FOXG1P55316 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXG1P55316 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXG1P55316 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXG1P55316 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXG1P55316 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
FOXG1P55316 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXG1P55316 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXG1P55316 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXG1P55316 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXG1P55316 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXG1P55316 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.78■□□□□ 0.76
FOXG1P55316 AC006455.2-201ENST00000429931 906 ntBASIC19.78■□□□□ 0.76
FOXG1P55316 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXG1P55316 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
FOXG1P55316 AC110285.6-201ENST00000617652 491 ntBASIC19.78■□□□□ 0.76
FOXG1P55316 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXG1P55316 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXG1P55316 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
FOXG1P55316 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXG1P55316 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXG1P55316 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXG1P55316 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
FOXG1P55316 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
FOXG1P55316 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXG1P55316 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
FOXG1P55316 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXG1P55316 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXG1P55316 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
FOXG1P55316 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXG1P55316 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXG1P55316 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXG1P55316 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXG1P55316 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
FOXG1P55316 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXG1P55316 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXG1P55316 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXG1P55316 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXG1P55316 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXG1P55316 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXG1P55316 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
FOXG1P55316 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
FOXG1P55316 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FOXG1P55316 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXG1P55316 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXG1P55316 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXG1P55316 AC079630.1-202ENST00000618127 1840 ntBASIC19.76■□□□□ 0.75
FOXG1P55316 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXG1P55316 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FOXG1P55316 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXG1P55316 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXG1P55316 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXG1P55316 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXG1P55316 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXG1P55316 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXG1P55316 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXG1P55316 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FOXG1P55316 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXG1P55316 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXG1P55316 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXG1P55316 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXG1P55316 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXG1P55316 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXG1P55316 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXG1P55316 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXG1P55316 UNC93B3-201ENST00000308076 687 ntBASIC19.74■□□□□ 0.75
FOXG1P55316 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
FOXG1P55316 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXG1P55316 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
FOXG1P55316 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
FOXG1P55316 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXG1P55316 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXG1P55316 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXG1P55316 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXG1P55316 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXG1P55316 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXG1P55316 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXG1P55316 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXG1P55316 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXG1P55316 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXG1P55316 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXG1P55316 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXG1P55316 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXG1P55316 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
FOXG1P55316 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FOXG1P55316 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXG1P55316 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXG1P55316 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXG1P55316 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
FOXG1P55316 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXG1P55316 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXG1P55316 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXG1P55316 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXG1P55316 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXG1P55316 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXG1P55316 AC144652.1-201ENST00000609974 1624 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms