Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.73■□□□□ 0.75
ATF1P18846 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATF1P18846 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ATF1P18846 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATF1P18846 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATF1P18846 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.73■□□□□ 0.75
ATF1P18846 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATF1P18846 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATF1P18846 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATF1P18846 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATF1P18846 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATF1P18846 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF1P18846 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ATF1P18846 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.72■□□□□ 0.75
ATF1P18846 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ATF1P18846 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ATF1P18846 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF1P18846 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.71■□□□□ 0.75
ATF1P18846 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.71■□□□□ 0.75
ATF1P18846 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.71■□□□□ 0.75
ATF1P18846 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF1P18846 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 AC011551.1-201ENST00000614101 683 ntBASIC19.7■□□□□ 0.74
ATF1P18846 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ATF1P18846 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF1P18846 AL022069.1-201ENST00000568025 1636 ntBASIC19.69■□□□□ 0.74
ATF1P18846 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATF1P18846 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.69■□□□□ 0.74
ATF1P18846 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF1P18846 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.69■□□□□ 0.74
ATF1P18846 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.69■□□□□ 0.74
ATF1P18846 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATF1P18846 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.69■□□□□ 0.74
ATF1P18846 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF1P18846 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF1P18846 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF1P18846 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF1P18846 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.68■□□□□ 0.74
ATF1P18846 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
ATF1P18846 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF1P18846 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ATF1P18846 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF1P18846 AC242852.2-201ENST00000615738 1807 ntBASIC19.68■□□□□ 0.74
ATF1P18846 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF1P18846 AC139795.1-202ENST00000500444 432 ntBASIC19.68■□□□□ 0.74
ATF1P18846 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.68■□□□□ 0.74
ATF1P18846 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.68■□□□□ 0.74
ATF1P18846 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.68■□□□□ 0.74
ATF1P18846 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.68■□□□□ 0.74
ATF1P18846 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF1P18846 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ATF1P18846 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.67■□□□□ 0.74
ATF1P18846 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF1P18846 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.67■□□□□ 0.74
ATF1P18846 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF1P18846 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF1P18846 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF1P18846 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF1P18846 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF1P18846 ABHD17AP5-201ENST00000580133 923 ntBASIC19.67■□□□□ 0.74
ATF1P18846 AC019171.1-201ENST00000601251 1056 ntBASIC19.67■□□□□ 0.74
ATF1P18846 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.67■□□□□ 0.74
ATF1P18846 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ATF1P18846 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF1P18846 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
ATF1P18846 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF1P18846 AL024507.2-201ENST00000606070 2574 ntBASIC19.66■□□□□ 0.74
ATF1P18846 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATF1P18846 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF1P18846 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF1P18846 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF1P18846 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.66■□□□□ 0.74
ATF1P18846 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF1P18846 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
ATF1P18846 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.66■□□□□ 0.74
ATF1P18846 AC022616.5-201ENST00000518796 181 ntBASIC19.66■□□□□ 0.74
ATF1P18846 DUX4L18-201ENST00000553347 1267 ntBASIC19.66■□□□□ 0.74
ATF1P18846 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF1P18846 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ATF1P18846 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF1P18846 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF1P18846 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF1P18846 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF1P18846 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.65■□□□□ 0.74
ATF1P18846 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF1P18846 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF1P18846 NTF6A-201ENST00000591175 560 ntBASIC19.65■□□□□ 0.74
ATF1P18846 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.65■□□□□ 0.74
ATF1P18846 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF1P18846 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF1P18846 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms