Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSIG8P0DPA2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VSIG8P0DPA2 AC012354.3-201ENST00000623734 483 ntBASIC19.25■□□□□ 0.67
VSIG8P0DPA2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSIG8P0DPA2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSIG8P0DPA2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSIG8P0DPA2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VSIG8P0DPA2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VSIG8P0DPA2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
VSIG8P0DPA2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VSIG8P0DPA2 AC079630.1-202ENST00000618127 1840 ntBASIC19.23■□□□□ 0.67
VSIG8P0DPA2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VSIG8P0DPA2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.23■□□□□ 0.67
VSIG8P0DPA2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VSIG8P0DPA2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.23■□□□□ 0.67
VSIG8P0DPA2 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.23■□□□□ 0.67
VSIG8P0DPA2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VSIG8P0DPA2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VSIG8P0DPA2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VSIG8P0DPA2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VSIG8P0DPA2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 ESRRAP2-201ENST00000418437 1549 ntBASIC19.22■□□□□ 0.67
VSIG8P0DPA2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 AC022616.5-201ENST00000518796 181 ntBASIC19.22■□□□□ 0.67
VSIG8P0DPA2 AC019171.1-201ENST00000601251 1056 ntBASIC19.22■□□□□ 0.67
VSIG8P0DPA2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.22■□□□□ 0.67
VSIG8P0DPA2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VSIG8P0DPA2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.21■□□□□ 0.67
VSIG8P0DPA2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VSIG8P0DPA2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VSIG8P0DPA2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.21■□□□□ 0.67
VSIG8P0DPA2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VSIG8P0DPA2 KRT18P60-201ENST00000312876 1297 ntBASIC19.21■□□□□ 0.67
VSIG8P0DPA2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VSIG8P0DPA2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VSIG8P0DPA2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VSIG8P0DPA2 AC242852.2-201ENST00000615738 1807 ntBASIC19.21■□□□□ 0.67
VSIG8P0DPA2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.2■□□□□ 0.66
VSIG8P0DPA2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VSIG8P0DPA2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VSIG8P0DPA2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VSIG8P0DPA2 AC137767.1-201ENST00000602918 1920 ntBASIC19.18■□□□□ 0.66
VSIG8P0DPA2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VSIG8P0DPA2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VSIG8P0DPA2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VSIG8P0DPA2 AC019069.1-201ENST00000610008 1333 ntBASIC19.18■□□□□ 0.66
VSIG8P0DPA2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VSIG8P0DPA2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VSIG8P0DPA2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VSIG8P0DPA2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VSIG8P0DPA2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms