Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TDP2O95551 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TDP2O95551 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TDP2O95551 AL136116.3-201ENST00000402907 1138 ntBASIC25.56■■□□□ 1.68
TDP2O95551 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
TDP2O95551 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.56■■□□□ 1.68
TDP2O95551 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
TDP2O95551 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TDP2O95551 AC008406.3-201ENST00000620001 1374 ntBASIC25.56■■□□□ 1.68
TDP2O95551 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TDP2O95551 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TDP2O95551 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.55■■□□□ 1.68
TDP2O95551 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.55■■□□□ 1.68
TDP2O95551 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
TDP2O95551 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TDP2O95551 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.55■■□□□ 1.68
TDP2O95551 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.54■■□□□ 1.68
TDP2O95551 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.54■■□□□ 1.68
TDP2O95551 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TDP2O95551 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.54■■□□□ 1.68
TDP2O95551 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
TDP2O95551 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TDP2O95551 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.54■■□□□ 1.68
TDP2O95551 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TDP2O95551 AC079630.1-202ENST00000618127 1840 ntBASIC25.53■■□□□ 1.68
TDP2O95551 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TDP2O95551 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
TDP2O95551 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TDP2O95551 ANOS2P-203ENST00000472227 1816 ntBASIC25.52■■□□□ 1.68
TDP2O95551 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
TDP2O95551 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
TDP2O95551 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
TDP2O95551 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
TDP2O95551 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
TDP2O95551 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.51■■□□□ 1.67
TDP2O95551 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TDP2O95551 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.51■■□□□ 1.67
TDP2O95551 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
TDP2O95551 SRD5A1P1-201ENST00000442297 786 ntBASIC25.5■■□□□ 1.67
TDP2O95551 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.5■■□□□ 1.67
TDP2O95551 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.49■■□□□ 1.67
TDP2O95551 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TDP2O95551 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.49■■□□□ 1.67
TDP2O95551 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.49■■□□□ 1.67
TDP2O95551 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TDP2O95551 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.48■■□□□ 1.67
TDP2O95551 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TDP2O95551 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TDP2O95551 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
TDP2O95551 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TDP2O95551 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.48■■□□□ 1.67
TDP2O95551 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TDP2O95551 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.48■■□□□ 1.67
TDP2O95551 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
TDP2O95551 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.47■■□□□ 1.67
TDP2O95551 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
TDP2O95551 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TDP2O95551 AC099791.2-201ENST00000605725 427 ntBASIC25.47■■□□□ 1.67
TDP2O95551 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
TDP2O95551 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
TDP2O95551 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TDP2O95551 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
TDP2O95551 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.47■■□□□ 1.67
TDP2O95551 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.46■■□□□ 1.67
TDP2O95551 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.46■■□□□ 1.67
TDP2O95551 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
TDP2O95551 AC144652.1-201ENST00000609974 1624 ntBASIC25.46■■□□□ 1.67
TDP2O95551 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TDP2O95551 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
TDP2O95551 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
TDP2O95551 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TDP2O95551 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
TDP2O95551 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
TDP2O95551 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
TDP2O95551 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TDP2O95551 AC006455.2-201ENST00000429931 906 ntBASIC25.45■■□□□ 1.66
TDP2O95551 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.45■■□□□ 1.66
TDP2O95551 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.45■■□□□ 1.66
TDP2O95551 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TDP2O95551 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
TDP2O95551 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TDP2O95551 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.44■■□□□ 1.66
TDP2O95551 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TDP2O95551 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
TDP2O95551 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TDP2O95551 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TDP2O95551 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.44■■□□□ 1.66
TDP2O95551 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.44■■□□□ 1.66
TDP2O95551 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.44■■□□□ 1.66
TDP2O95551 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
TDP2O95551 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
TDP2O95551 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.44■■□□□ 1.66
TDP2O95551 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TDP2O95551 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TDP2O95551 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TDP2O95551 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.43■■□□□ 1.66
TDP2O95551 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TDP2O95551 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TDP2O95551 AC092068.2-201ENST00000590491 1708 ntBASIC25.43■■□□□ 1.66
TDP2O95551 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms