Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCA1O95477 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ABCA1O95477 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCA1O95477 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCA1O95477 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCA1O95477 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.79■□□□□ 0.6
ABCA1O95477 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ABCA1O95477 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCA1O95477 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCA1O95477 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCA1O95477 AC123595.1-201ENST00000440769 1046 ntBASIC18.79■□□□□ 0.6
ABCA1O95477 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.79■□□□□ 0.6
ABCA1O95477 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCA1O95477 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCA1O95477 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.78■□□□□ 0.6
ABCA1O95477 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCA1O95477 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ABCA1O95477 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.78■□□□□ 0.6
ABCA1O95477 MIR3181-201ENST00000578512 73 ntBASIC18.78■□□□□ 0.6
ABCA1O95477 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.78■□□□□ 0.6
ABCA1O95477 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.78■□□□□ 0.6
ABCA1O95477 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCA1O95477 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ABCA1O95477 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ABCA1O95477 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ABCA1O95477 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.78■□□□□ 0.6
ABCA1O95477 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ABCA1O95477 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.77■□□□□ 0.6
ABCA1O95477 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.77■□□□□ 0.6
ABCA1O95477 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.77■□□□□ 0.6
ABCA1O95477 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.77■□□□□ 0.6
ABCA1O95477 AL358852.1-201ENST00000623174 1268 ntBASIC18.77■□□□□ 0.6
ABCA1O95477 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ABCA1O95477 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ABCA1O95477 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.77■□□□□ 0.6
ABCA1O95477 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ABCA1O95477 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ABCA1O95477 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.77■□□□□ 0.6
ABCA1O95477 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
ABCA1O95477 AL137784.2-201ENST00000607332 1000 ntBASIC18.77■□□□□ 0.6
ABCA1O95477 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.77■□□□□ 0.59
ABCA1O95477 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ABCA1O95477 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.76■□□□□ 0.59
ABCA1O95477 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ABCA1O95477 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ABCA1O95477 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ABCA1O95477 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ABCA1O95477 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ABCA1O95477 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ABCA1O95477 AC027612.3-201ENST00000413684 1047 ntBASIC18.76■□□□□ 0.59
ABCA1O95477 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ABCA1O95477 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ABCA1O95477 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ABCA1O95477 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ABCA1O95477 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ABCA1O95477 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ABCA1O95477 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.75■□□□□ 0.59
ABCA1O95477 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ABCA1O95477 AL022069.1-201ENST00000568025 1636 ntBASIC18.75■□□□□ 0.59
ABCA1O95477 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.75■□□□□ 0.59
ABCA1O95477 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ABCA1O95477 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ABCA1O95477 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ABCA1O95477 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ABCA1O95477 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.75■□□□□ 0.59
ABCA1O95477 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.75■□□□□ 0.59
ABCA1O95477 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.75■□□□□ 0.59
ABCA1O95477 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.75■□□□□ 0.59
ABCA1O95477 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.74■□□□□ 0.59
ABCA1O95477 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ABCA1O95477 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ABCA1O95477 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ABCA1O95477 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ABCA1O95477 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ABCA1O95477 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ABCA1O95477 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ABCA1O95477 AC126544.1-201ENST00000580842 1059 ntBASIC18.74■□□□□ 0.59
ABCA1O95477 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ABCA1O95477 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.74■□□□□ 0.59
ABCA1O95477 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ABCA1O95477 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ABCA1O95477 MIR572-201ENST00000384983 95 ntBASIC18.74■□□□□ 0.59
ABCA1O95477 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ABCA1O95477 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ABCA1O95477 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.73■□□□□ 0.59
ABCA1O95477 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ABCA1O95477 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.73■□□□□ 0.59
ABCA1O95477 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ABCA1O95477 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.73■□□□□ 0.59
ABCA1O95477 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ABCA1O95477 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ABCA1O95477 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ABCA1O95477 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.72■□□□□ 0.59
ABCA1O95477 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ABCA1O95477 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ABCA1O95477 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ABCA1O95477 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.72■□□□□ 0.59
ABCA1O95477 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ABCA1O95477 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ABCA1O95477 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms