Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRDM1O75626 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PRDM1O75626 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
PRDM1O75626 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.61■■□□□ 1.85
PRDM1O75626 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.61■■□□□ 1.85
PRDM1O75626 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PRDM1O75626 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.61■■□□□ 1.85
PRDM1O75626 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.61■■□□□ 1.85
PRDM1O75626 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRDM1O75626 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
PRDM1O75626 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PRDM1O75626 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PRDM1O75626 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PRDM1O75626 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
PRDM1O75626 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.6■■□□□ 1.85
PRDM1O75626 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.6■■□□□ 1.85
PRDM1O75626 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
PRDM1O75626 AC005837.3-201ENST00000612163 286 ntBASIC26.6■■□□□ 1.85
PRDM1O75626 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PRDM1O75626 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PRDM1O75626 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PRDM1O75626 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PRDM1O75626 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRDM1O75626 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRDM1O75626 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.59■■□□□ 1.85
PRDM1O75626 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.59■■□□□ 1.85
PRDM1O75626 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.59■■□□□ 1.85
PRDM1O75626 AC009086.3-201ENST00000623486 1008 ntBASIC26.59■■□□□ 1.85
PRDM1O75626 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.59■■□□□ 1.85
PRDM1O75626 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRDM1O75626 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PRDM1O75626 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.58■■□□□ 1.85
PRDM1O75626 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PRDM1O75626 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRDM1O75626 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PRDM1O75626 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRDM1O75626 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRDM1O75626 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.58■■□□□ 1.84
PRDM1O75626 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.58■■□□□ 1.84
PRDM1O75626 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PRDM1O75626 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
PRDM1O75626 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PRDM1O75626 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
PRDM1O75626 DUX4L19-201ENST00000557448 1267 ntBASIC26.57■■□□□ 1.84
PRDM1O75626 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.57■■□□□ 1.84
PRDM1O75626 AC092171.4-201ENST00000609130 632 ntBASIC26.57■■□□□ 1.84
PRDM1O75626 AC241377.3-202ENST00000626088 1088 ntBASIC26.57■■□□□ 1.84
PRDM1O75626 AC241585.3-202ENST00000628937 1088 ntBASIC26.57■■□□□ 1.84
PRDM1O75626 AC245100.8-202ENST00000629247 1058 ntBASIC26.57■■□□□ 1.84
PRDM1O75626 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
PRDM1O75626 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PRDM1O75626 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRDM1O75626 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRDM1O75626 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.56■■□□□ 1.84
PRDM1O75626 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.56■■□□□ 1.84
PRDM1O75626 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRDM1O75626 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRDM1O75626 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PRDM1O75626 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRDM1O75626 AL031432.3-201ENST00000607698 485 ntBASIC26.55■■□□□ 1.84
PRDM1O75626 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.55■■□□□ 1.84
PRDM1O75626 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
PRDM1O75626 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PRDM1O75626 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.55■■□□□ 1.84
PRDM1O75626 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
PRDM1O75626 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRDM1O75626 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PRDM1O75626 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRDM1O75626 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.54■■□□□ 1.84
PRDM1O75626 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PRDM1O75626 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.54■■□□□ 1.84
PRDM1O75626 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PRDM1O75626 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PRDM1O75626 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
PRDM1O75626 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
PRDM1O75626 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.54■■□□□ 1.84
PRDM1O75626 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
PRDM1O75626 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.53■■□□□ 1.84
PRDM1O75626 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.53■■□□□ 1.84
PRDM1O75626 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.53■■□□□ 1.84
PRDM1O75626 AC133561.4-201ENST00000566112 224 ntBASIC26.53■■□□□ 1.84
PRDM1O75626 MIR3181-201ENST00000578512 73 ntBASIC26.53■■□□□ 1.84
PRDM1O75626 MIR4767-201ENST00000582827 78 ntBASIC26.53■■□□□ 1.84
PRDM1O75626 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.53■■□□□ 1.84
PRDM1O75626 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.53■■□□□ 1.84
PRDM1O75626 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PRDM1O75626 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.53■■□□□ 1.84
PRDM1O75626 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRDM1O75626 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
PRDM1O75626 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRDM1O75626 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.53■■□□□ 1.84
PRDM1O75626 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PRDM1O75626 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.53■■□□□ 1.84
PRDM1O75626 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
PRDM1O75626 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRDM1O75626 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PRDM1O75626 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
PRDM1O75626 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PRDM1O75626 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PRDM1O75626 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms