Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.31■□□□□ 0.84
SMAD9O15198 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD9O15198 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD9O15198 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD9O15198 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD9O15198 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD9O15198 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.3■□□□□ 0.84
SMAD9O15198 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD9O15198 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD9O15198 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SMAD9O15198 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD9O15198 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.3■□□□□ 0.84
SMAD9O15198 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD9O15198 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SMAD9O15198 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
SMAD9O15198 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SMAD9O15198 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD9O15198 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMAD9O15198 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD9O15198 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD9O15198 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD9O15198 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.29■□□□□ 0.84
SMAD9O15198 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.29■□□□□ 0.84
SMAD9O15198 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD9O15198 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD9O15198 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD9O15198 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SMAD9O15198 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD9O15198 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMAD9O15198 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMAD9O15198 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SMAD9O15198 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SMAD9O15198 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD9O15198 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.28■□□□□ 0.84
SMAD9O15198 AL356740.2-201ENST00000601559 647 ntBASIC20.28■□□□□ 0.84
SMAD9O15198 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.28■□□□□ 0.84
SMAD9O15198 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD9O15198 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SMAD9O15198 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD9O15198 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD9O15198 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD9O15198 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD9O15198 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD9O15198 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD9O15198 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.27■□□□□ 0.84
SMAD9O15198 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.27■□□□□ 0.84
SMAD9O15198 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SMAD9O15198 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.27■□□□□ 0.84
SMAD9O15198 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SMAD9O15198 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD9O15198 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.27■□□□□ 0.84
SMAD9O15198 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SMAD9O15198 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMAD9O15198 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMAD9O15198 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
SMAD9O15198 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMAD9O15198 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMAD9O15198 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD9O15198 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD9O15198 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD9O15198 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD9O15198 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD9O15198 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD9O15198 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.26■□□□□ 0.83
SMAD9O15198 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.26■□□□□ 0.83
SMAD9O15198 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD9O15198 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD9O15198 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD9O15198 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SMAD9O15198 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD9O15198 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.25■□□□□ 0.83
SMAD9O15198 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.25■□□□□ 0.83
SMAD9O15198 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.25■□□□□ 0.83
SMAD9O15198 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD9O15198 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD9O15198 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD9O15198 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD9O15198 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.24■□□□□ 0.83
SMAD9O15198 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD9O15198 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.24■□□□□ 0.83
SMAD9O15198 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.24■□□□□ 0.83
SMAD9O15198 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.24■□□□□ 0.83
SMAD9O15198 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.24■□□□□ 0.83
SMAD9O15198 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.24■□□□□ 0.83
SMAD9O15198 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD9O15198 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.24■□□□□ 0.83
SMAD9O15198 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD9O15198 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD9O15198 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.23■□□□□ 0.83
SMAD9O15198 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.23■□□□□ 0.83
SMAD9O15198 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.23■□□□□ 0.83
SMAD9O15198 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMAD9O15198 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMAD9O15198 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.23■□□□□ 0.83
SMAD9O15198 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SMAD9O15198 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMAD9O15198 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD9O15198 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD9O15198 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD9O15198 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms