Protein–RNA interactions for Protein: O14745

SLC9A3R1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, humanhuman

Predicted RBP Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1O14745 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC9A3R1O14745 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC9A3R1O14745 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC9A3R1O14745 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.17■■□□□ 1.3
SLC9A3R1O14745 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.17■■□□□ 1.3
SLC9A3R1O14745 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC9A3R1O14745 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.17■■□□□ 1.3
SLC9A3R1O14745 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC9A3R1O14745 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC9A3R1O14745 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC9A3R1O14745 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.16■■□□□ 1.3
SLC9A3R1O14745 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC9A3R1O14745 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC9A3R1O14745 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.16■■□□□ 1.3
SLC9A3R1O14745 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC9A3R1O14745 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC9A3R1O14745 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC9A3R1O14745 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC9A3R1O14745 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.15■■□□□ 1.3
SLC9A3R1O14745 AC126544.1-201ENST00000580842 1059 ntBASIC23.15■■□□□ 1.3
SLC9A3R1O14745 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC9A3R1O14745 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.3
SLC9A3R1O14745 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.14■■□□□ 1.3
SLC9A3R1O14745 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.14■■□□□ 1.3
SLC9A3R1O14745 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SLC9A3R1O14745 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
SLC9A3R1O14745 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC9A3R1O14745 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC9A3R1O14745 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.14■■□□□ 1.29
SLC9A3R1O14745 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC9A3R1O14745 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC9A3R1O14745 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC9A3R1O14745 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC9A3R1O14745 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC9A3R1O14745 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC9A3R1O14745 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC9A3R1O14745 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC9A3R1O14745 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SLC9A3R1O14745 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC9A3R1O14745 MIR6821-201ENST00000617625 74 ntBASIC23.13■■□□□ 1.29
SLC9A3R1O14745 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC9A3R1O14745 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC9A3R1O14745 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC9A3R1O14745 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC9A3R1O14745 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC9A3R1O14745 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC9A3R1O14745 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC9A3R1O14745 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC9A3R1O14745 AC097381.1-201ENST00000429019 1296 ntBASIC23.12■■□□□ 1.29
SLC9A3R1O14745 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC9A3R1O14745 AL499627.2-201ENST00000606283 725 ntBASIC23.12■■□□□ 1.29
SLC9A3R1O14745 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.12■■□□□ 1.29
SLC9A3R1O14745 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 DUX4L4-201ENST00000566884 1269 ntBASIC23.11■■□□□ 1.29
SLC9A3R1O14745 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 AC133637.1-201ENST00000624115 1537 ntBASIC23.11■■□□□ 1.29
SLC9A3R1O14745 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC9A3R1O14745 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC9A3R1O14745 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC9A3R1O14745 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC9A3R1O14745 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC9A3R1O14745 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC9A3R1O14745 AC020928.2-201ENST00000588717 2197 ntBASIC23.1■■□□□ 1.29
SLC9A3R1O14745 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
SLC9A3R1O14745 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.09■■□□□ 1.29
SLC9A3R1O14745 SLC47A1P1-202ENST00000449666 945 ntBASIC23.09■■□□□ 1.29
SLC9A3R1O14745 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC9A3R1O14745 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SLC9A3R1O14745 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.08■■□□□ 1.29
SLC9A3R1O14745 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC9A3R1O14745 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC9A3R1O14745 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SLC9A3R1O14745 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SLC9A3R1O14745 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC9A3R1O14745 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC9A3R1O14745 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC9A3R1O14745 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SLC9A3R1O14745 AC144652.1-201ENST00000609974 1624 ntBASIC23.08■■□□□ 1.28
SLC9A3R1O14745 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC9A3R1O14745 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
SLC9A3R1O14745 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLC9A3R1O14745 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC9A3R1O14745 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SLC9A3R1O14745 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.07■■□□□ 1.28
SLC9A3R1O14745 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLC9A3R1O14745 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC9A3R1O14745 LINC01529-204ENST00000636474 1715 ntBASIC23.07■■□□□ 1.28
SLC9A3R1O14745 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms