Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 pRNA.6-201ENST00000610482 90 ntBASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 pRNA.5-201ENST00000612139 90 ntBASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 pRNA.11-201ENST00000618423 90 ntBASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 pRNA.13-201ENST00000619112 90 ntBASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 AC136469.2-201ENST00000623944 1028 ntBASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CENPVL3A0A0U1RRI6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPVL3A0A0U1RRI6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPVL3A0A0U1RRI6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPVL3A0A0U1RRI6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPVL3A0A0U1RRI6 ZNRF2P3-201ENST00000424200 374 ntBASIC18.27■□□□□ 0.52
CENPVL3A0A0U1RRI6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.27■□□□□ 0.52
CENPVL3A0A0U1RRI6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPVL3A0A0U1RRI6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.27■□□□□ 0.51
CENPVL3A0A0U1RRI6 AC004812.2-201ENST00000611079 2094 ntBASIC18.27■□□□□ 0.51
CENPVL3A0A0U1RRI6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CENPVL3A0A0U1RRI6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CENPVL3A0A0U1RRI6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 AC091305.1-201ENST00000479476 895 ntBASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CENPVL3A0A0U1RRI6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 AC008764.7-201ENST00000593779 1081 ntBASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 RASA4CP-201ENST00000424092 1398 ntBASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.24■□□□□ 0.51
CENPVL3A0A0U1RRI6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 FP325331.1-202ENST00000623531 1380 ntBASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 AC105265.2-201ENST00000467189 838 ntBASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 AC027682.1-201ENST00000562846 899 ntBASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CENPVL3A0A0U1RRI6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 CA15P2-201ENST00000611168 834 ntBASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPVL3A0A0U1RRI6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms