Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-4A0A0B4J246 ABCB10P4-201ENST00000566803 2184 ntBASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 ATP5G2P3-201ENST00000429083 425 ntBASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 DUX4L18-201ENST00000553347 1267 ntBASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-4A0A0B4J246 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 TSPY13P-201ENST00000338964 914 ntBASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 LINC00565-201ENST00000562710 2331 ntBASIC15.59■□□□□ 0.09
TRAV8-4A0A0B4J246 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-4A0A0B4J246 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-4A0A0B4J246 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-4A0A0B4J246 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
TRAV8-4A0A0B4J246 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-4A0A0B4J246 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-4A0A0B4J246 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV8-4A0A0B4J246 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-4A0A0B4J246 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-4A0A0B4J246 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 C1orf229-201ENST00000623686 2258 ntBASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 AC004987.1-201ENST00000428627 508 ntBASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV8-4A0A0B4J246 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 IDNK-201ENST00000376417 511 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms