Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 AC126177.7-201ENST00000547904 679 ntBASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV13-2A0A0B4J235 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAV13-2A0A0B4J235 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV13-2A0A0B4J235 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV13-2A0A0B4J235 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV13-2A0A0B4J235 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAV13-2A0A0B4J235 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV13-2A0A0B4J235 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV13-2A0A0B4J235 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV13-2A0A0B4J235 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
TRAV13-2A0A0B4J235 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV13-2A0A0B4J235 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV13-2A0A0B4J235 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-2A0A0B4J235 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV13-2A0A0B4J235 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV13-2A0A0B4J235 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-2A0A0B4J235 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-2A0A0B4J235 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV13-2A0A0B4J235 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-2A0A0B4J235 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV13-2A0A0B4J235 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV13-2A0A0B4J235 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 CHML-204ENST00000638121 920 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-2A0A0B4J235 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 CHST11-203ENST00000547956 936 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-2A0A0B4J235 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 C11orf96-202ENST00000528572 1834 ntBASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 AL161729.1-201ENST00000604104 1402 ntBASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 AC092053.2-201ENST00000640557 1818 ntBASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-2A0A0B4J235 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms