Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC006480.2-201ENST00000609770 1337 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 LINC01165-201ENST00000445190 1623 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC015688.4-201ENST00000580780 1647 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC015909.3-201ENST00000572855 1794 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 FAM90A2P-201ENST00000511144 1395 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 FAM90A25P-201ENST00000528404 1395 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 OR2K2-202ENST00000374428 1038 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC026320.2-201ENST00000434379 478 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 OR2R1P-201ENST00000441404 914 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 FGFR3P1-201ENST00000449999 601 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 RPS2P36-201ENST00000456516 831 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 RN7SL67P-201ENST00000492147 296 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 PGAM1P5-201ENST00000548011 764 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC003686.1-201ENST00000550956 1034 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC026803.1-201ENST00000569130 274 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 LINC01783-202ENST00000614408 828 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 BX284668.2-205ENST00000619677 828 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 AC007718.1-201ENST00000621078 280 ntBASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CLDND2Q8NHS1 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 KHSRPP1-201ENST00000427983 1768 ntBASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 CAP2P1-201ENST00000557743 1390 ntBASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms