Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 AC253536.4-201ENST00000440539 267 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 AP002803.1-201ENST00000528836 498 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 OR5BD1P-201ENST00000532527 817 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 AC007881.3-201ENST00000608897 607 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 AC026748.1-201ENST00000624349 3251 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 RCC2P1-201ENST00000452257 1476 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 AC061965.1-201ENST00000560524 1465 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 AL157996.1-201ENST00000624684 2299 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 ST20-AS1-201ENST00000560255 4223 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 RPL17P11-201ENST00000417593 544 ntBASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 RN7SL788P-201ENST00000460504 316 ntBASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AC095040.1-201ENST00000513286 675 ntBASIC15.17■□□□□ 0.02
BEST2Q8NFU1 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 HERC2P11-201ENST00000562845 725 ntBASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AC100756.2-201ENST00000569537 736 ntBASIC15.17■□□□□ 0.02
BEST2Q8NFU1 MIR2392-201ENST00000584881 84 ntBASIC15.17■□□□□ 0.02
BEST2Q8NFU1 RPL17P45-201ENST00000586289 509 ntBASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AC084781.1-201ENST00000613737 656 ntBASIC15.17■□□□□ 0.02
BEST2Q8NFU1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BEST2Q8NFU1 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 TBC1D27-202ENST00000424239 1573 ntBASIC15.16■□□□□ 0.02
BEST2Q8NFU1 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms