Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 AL353637.1-201ENST00000451571 732 ntBASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 CEP164P1-201ENST00000455142 418 ntBASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 MARK2P5-201ENST00000507649 634 ntBASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 AL805961.1-203ENST00000641078 1258 ntBASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 AC023794.5-201ENST00000564380 2157 ntBASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
HERC4Q5GLZ8 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 AC125604.1-201ENST00000496255 707 ntBASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 AC005357.2-202ENST00000590507 1060 ntBASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 AL157813.1-201ENST00000612996 587 ntBASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 AP001065.2-201ENST00000617205 644 ntBASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 AC006453.1-201ENST00000636037 1257 ntBASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 LINC00115-201ENST00000473798 1317 ntBASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HERC4Q5GLZ8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms