Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ACTA1P68133 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ACTA1P68133 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ACTA1P68133 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ACTA1P68133 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ACTA1P68133 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.68□□□□□ -0.38
ACTA1P68133 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.68□□□□□ -0.38
ACTA1P68133 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ACTA1P68133 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ACTA1P68133 AC125807.2-201ENST00000513358 3514 ntBASIC12.67□□□□□ -0.38
ACTA1P68133 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 AL008718.2-201ENST00000609206 1313 ntBASIC12.67□□□□□ -0.38
ACTA1P68133 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.67□□□□□ -0.38
ACTA1P68133 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 AL590640.2-201ENST00000457038 527 ntBASIC12.67□□□□□ -0.38
ACTA1P68133 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.67□□□□□ -0.38
ACTA1P68133 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.67□□□□□ -0.38
ACTA1P68133 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 AC073413.1-201ENST00000603927 732 ntBASIC12.67□□□□□ -0.38
ACTA1P68133 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.67□□□□□ -0.38
ACTA1P68133 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ACTA1P68133 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 AL805961.2-201ENST00000642139 4817 ntBASIC12.67□□□□□ -0.38
ACTA1P68133 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.67□□□□□ -0.38
ACTA1P68133 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.67□□□□□ -0.38
ACTA1P68133 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 AC026271.4-201ENST00000578214 1833 ntBASIC12.67□□□□□ -0.38
ACTA1P68133 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.67□□□□□ -0.38
ACTA1P68133 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTA1P68133 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTA1P68133 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 SHMT1P1-201ENST00000419974 1312 ntBASIC12.66□□□□□ -0.38
ACTA1P68133 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.66□□□□□ -0.38
ACTA1P68133 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
ACTA1P68133 Z82170.1-201ENST00000625081 3192 ntBASIC12.66□□□□□ -0.38
ACTA1P68133 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.66□□□□□ -0.38
ACTA1P68133 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 AC005229.1-201ENST00000392885 409 ntBASIC12.66□□□□□ -0.38
ACTA1P68133 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 SNORA50C-201ENST00000408535 133 ntBASIC12.66□□□□□ -0.38
ACTA1P68133 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ACTA1P68133 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTA1P68133 CRB3P1-201ENST00000449338 276 ntBASIC12.66□□□□□ -0.38
ACTA1P68133 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.66□□□□□ -0.38
ACTA1P68133 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.66□□□□□ -0.38
ACTA1P68133 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.66□□□□□ -0.38
ACTA1P68133 AP001889.1-201ENST00000525414 633 ntBASIC12.66□□□□□ -0.38
ACTA1P68133 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.66□□□□□ -0.38
ACTA1P68133 AC140658.4-201ENST00000561990 352 ntBASIC12.66□□□□□ -0.38
ACTA1P68133 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.66□□□□□ -0.38
ACTA1P68133 AC132192.2-201ENST00000596206 1147 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms