Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.2□□□□□ -0.14
AP1S1P61966 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
AP1S1P61966 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.2□□□□□ -0.14
AP1S1P61966 AL512306.1-201ENST00000432698 848 ntBASIC14.2□□□□□ -0.14
AP1S1P61966 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
AP1S1P61966 NDUFS6P1-201ENST00000485187 316 ntBASIC14.2□□□□□ -0.14
AP1S1P61966 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.2□□□□□ -0.14
AP1S1P61966 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.2□□□□□ -0.14
AP1S1P61966 AC145285.5-201ENST00000562217 361 ntBASIC14.2□□□□□ -0.14
AP1S1P61966 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.2□□□□□ -0.14
AP1S1P61966 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S1P61966 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S1P61966 AC015967.2-201ENST00000624092 234 ntBASIC14.2□□□□□ -0.14
AP1S1P61966 AC006435.4-201ENST00000625037 234 ntBASIC14.2□□□□□ -0.14
AP1S1P61966 AL356737.1-201ENST00000634391 234 ntBASIC14.2□□□□□ -0.14
AP1S1P61966 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.2□□□□□ -0.14
AP1S1P61966 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 TBC1D27-202ENST00000424239 1573 ntBASIC14.2□□□□□ -0.14
AP1S1P61966 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 ST20-AS1-201ENST00000560255 4223 ntBASIC14.2□□□□□ -0.14
AP1S1P61966 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S1P61966 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S1P61966 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
AP1S1P61966 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S1P61966 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S1P61966 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
AP1S1P61966 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
AP1S1P61966 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
AP1S1P61966 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.19□□□□□ -0.14
AP1S1P61966 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
AP1S1P61966 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.19□□□□□ -0.14
AP1S1P61966 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 AC008620.2-201ENST00000510294 1569 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.19□□□□□ -0.14
AP1S1P61966 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
AP1S1P61966 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.19□□□□□ -0.14
AP1S1P61966 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 EEF1DP6-201ENST00000449232 372 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.19□□□□□ -0.14
AP1S1P61966 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 RN7SL788P-201ENST00000460504 316 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 CHCHD2P9-201ENST00000461726 456 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.19□□□□□ -0.14
AP1S1P61966 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
AP1S1P61966 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.19□□□□□ -0.14
AP1S1P61966 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.19□□□□□ -0.14
AP1S1P61966 AC138701.2-201ENST00000553634 226 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.19□□□□□ -0.14
AP1S1P61966 RHOQP1-201ENST00000555758 579 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
AP1S1P61966 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.19□□□□□ -0.14
AP1S1P61966 AC132825.4-202ENST00000578792 434 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.19□□□□□ -0.14
AP1S1P61966 AC005632.3-201ENST00000605544 308 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 AC103810.10-201ENST00000606504 343 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 AC084346.2-201ENST00000607097 949 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 AC009145.4-201ENST00000625119 1294 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.19□□□□□ -0.14
AP1S1P61966 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
AP1S1P61966 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
AP1S1P61966 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.19□□□□□ -0.14
AP1S1P61966 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.19□□□□□ -0.14
AP1S1P61966 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
AP1S1P61966 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 AC006372.4-201ENST00000624122 1543 ntBASIC14.19□□□□□ -0.14
AP1S1P61966 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S1P61966 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.19□□□□□ -0.14
AP1S1P61966 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
AP1S1P61966 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S1P61966 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S1P61966 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms