Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
CMC4P56277 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CMC4P56277 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CMC4P56277 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CMC4P56277 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CMC4P56277 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.55□□□□□ -0.72
CMC4P56277 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CMC4P56277 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CMC4P56277 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CMC4P56277 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC10.55□□□□□ -0.72
CMC4P56277 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CMC4P56277 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CMC4P56277 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CMC4P56277 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.54□□□□□ -0.72
CMC4P56277 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC10.54□□□□□ -0.72
CMC4P56277 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC10.54□□□□□ -0.72
CMC4P56277 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CMC4P56277 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC10.54□□□□□ -0.72
CMC4P56277 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CMC4P56277 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 AL583805.1-201ENST00000391389 531 ntBASIC10.54□□□□□ -0.72
CMC4P56277 ACTG1P2-201ENST00000415776 1125 ntBASIC10.54□□□□□ -0.72
CMC4P56277 CMC1-204ENST00000423894 549 ntTSL 2 BASIC10.54□□□□□ -0.72
CMC4P56277 ACTG1P11-201ENST00000425411 1125 ntBASIC10.54□□□□□ -0.72
CMC4P56277 PDIA3P2-201ENST00000428073 158 ntBASIC10.54□□□□□ -0.72
CMC4P56277 AC073150.1-201ENST00000450406 1084 ntBASIC10.54□□□□□ -0.72
CMC4P56277 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC10.54□□□□□ -0.72
CMC4P56277 UPF3AP2-201ENST00000457924 1132 ntBASIC10.54□□□□□ -0.72
CMC4P56277 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 RN7SL767P-201ENST00000493013 295 ntBASIC10.54□□□□□ -0.72
CMC4P56277 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.54□□□□□ -0.72
CMC4P56277 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
CMC4P56277 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
CMC4P56277 AC242376.1-201ENST00000559033 726 ntBASIC10.54□□□□□ -0.72
CMC4P56277 AC145285.5-201ENST00000562217 361 ntBASIC10.54□□□□□ -0.72
CMC4P56277 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.54□□□□□ -0.72
CMC4P56277 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CMC4P56277 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CMC4P56277 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 AC097359.2-201ENST00000604992 2389 ntBASIC10.54□□□□□ -0.72
CMC4P56277 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC10.54□□□□□ -0.72
CMC4P56277 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.54□□□□□ -0.72
CMC4P56277 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 AC010336.1-201ENST00000539278 4739 ntBASIC10.54□□□□□ -0.72
CMC4P56277 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CMC4P56277 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
CMC4P56277 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.54□□□□□ -0.72
CMC4P56277 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
CMC4P56277 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC10.53□□□□□ -0.72
CMC4P56277 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CMC4P56277 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.53□□□□□ -0.72
CMC4P56277 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
CMC4P56277 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms