Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.3□□□□□ -0.44
EFNB2P52799 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
EFNB2P52799 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.3□□□□□ -0.44
EFNB2P52799 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.3□□□□□ -0.44
EFNB2P52799 BNIP3P29-201ENST00000598302 571 ntBASIC12.3□□□□□ -0.44
EFNB2P52799 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.3□□□□□ -0.44
EFNB2P52799 AC011447.5-201ENST00000616168 564 ntBASIC12.3□□□□□ -0.44
EFNB2P52799 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 AC108024.1-201ENST00000626286 1721 ntBASIC12.3□□□□□ -0.44
EFNB2P52799 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
EFNB2P52799 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.3□□□□□ -0.44
EFNB2P52799 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.3□□□□□ -0.44
EFNB2P52799 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
EFNB2P52799 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
EFNB2P52799 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 VENTXP1-201ENST00000569334 2716 ntBASIC12.3□□□□□ -0.44
EFNB2P52799 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
EFNB2P52799 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
EFNB2P52799 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.29□□□□□ -0.44
EFNB2P52799 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 AC104758.3-203ENST00000562938 2123 ntBASIC12.29□□□□□ -0.44
EFNB2P52799 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
EFNB2P52799 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
EFNB2P52799 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
EFNB2P52799 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.29□□□□□ -0.44
EFNB2P52799 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
EFNB2P52799 BAATP1-201ENST00000412284 1225 ntBASIC12.29□□□□□ -0.44
EFNB2P52799 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.29□□□□□ -0.44
EFNB2P52799 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.29□□□□□ -0.44
EFNB2P52799 AC092658.1-201ENST00000505836 891 ntBASIC12.29□□□□□ -0.44
EFNB2P52799 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.29□□□□□ -0.44
EFNB2P52799 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.29□□□□□ -0.44
EFNB2P52799 AP003171.2-201ENST00000528208 925 ntBASIC12.29□□□□□ -0.44
EFNB2P52799 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.29□□□□□ -0.44
EFNB2P52799 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.29□□□□□ -0.44
EFNB2P52799 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.29□□□□□ -0.44
EFNB2P52799 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.29□□□□□ -0.44
EFNB2P52799 RN7SL48P-201ENST00000579283 293 ntBASIC12.29□□□□□ -0.44
EFNB2P52799 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.29□□□□□ -0.44
EFNB2P52799 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
EFNB2P52799 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.29□□□□□ -0.44
EFNB2P52799 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
EFNB2P52799 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.29□□□□□ -0.44
EFNB2P52799 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
EFNB2P52799 AL645937.6-201ENST00000641122 3727 ntBASIC12.28□□□□□ -0.44
EFNB2P52799 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 AL122018.1-201ENST00000446607 2310 ntBASIC12.28□□□□□ -0.44
EFNB2P52799 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms