Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
APOBEC1P41238 AC072061.1-201ENST00000569710 2234 ntBASIC12.8□□□□□ -0.36
APOBEC1P41238 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOBEC1P41238 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOBEC1P41238 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOBEC1P41238 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.8□□□□□ -0.36
APOBEC1P41238 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.8□□□□□ -0.36
APOBEC1P41238 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
APOBEC1P41238 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
APOBEC1P41238 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.79□□□□□ -0.36
APOBEC1P41238 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
APOBEC1P41238 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
APOBEC1P41238 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.79□□□□□ -0.36
APOBEC1P41238 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.79□□□□□ -0.36
APOBEC1P41238 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.79□□□□□ -0.36
APOBEC1P41238 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.79□□□□□ -0.36
APOBEC1P41238 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.79□□□□□ -0.36
APOBEC1P41238 RN7SL11P-201ENST00000471305 293 ntBASIC12.79□□□□□ -0.36
APOBEC1P41238 HIST2H2BC-201ENST00000498492 580 ntBASIC12.79□□□□□ -0.36
APOBEC1P41238 AC005740.1-201ENST00000515639 522 ntBASIC12.79□□□□□ -0.36
APOBEC1P41238 ALG1L13P-202ENST00000519320 584 ntBASIC12.79□□□□□ -0.36
APOBEC1P41238 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.79□□□□□ -0.36
APOBEC1P41238 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.79□□□□□ -0.36
APOBEC1P41238 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
APOBEC1P41238 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.79□□□□□ -0.36
APOBEC1P41238 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 AC107918.4-201ENST00000641966 3141 ntBASIC12.79□□□□□ -0.36
APOBEC1P41238 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.79□□□□□ -0.36
APOBEC1P41238 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.79□□□□□ -0.36
APOBEC1P41238 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOBEC1P41238 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.78□□□□□ -0.36
APOBEC1P41238 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
APOBEC1P41238 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.78□□□□□ -0.36
APOBEC1P41238 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
APOBEC1P41238 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
APOBEC1P41238 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.78□□□□□ -0.36
APOBEC1P41238 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.78□□□□□ -0.36
APOBEC1P41238 AL353637.1-201ENST00000451571 732 ntBASIC12.78□□□□□ -0.36
APOBEC1P41238 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.78□□□□□ -0.36
APOBEC1P41238 RN7SL258P-201ENST00000478664 300 ntBASIC12.78□□□□□ -0.36
APOBEC1P41238 AC008723.1-201ENST00000506922 207 ntBASIC12.78□□□□□ -0.36
APOBEC1P41238 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.78□□□□□ -0.36
APOBEC1P41238 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.78□□□□□ -0.36
APOBEC1P41238 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOBEC1P41238 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
APOBEC1P41238 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.78□□□□□ -0.36
APOBEC1P41238 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.78□□□□□ -0.36
APOBEC1P41238 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.78□□□□□ -0.36
APOBEC1P41238 RN7SL455P-201ENST00000580629 282 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms