Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRIM23P36406 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM23P36406 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TRIM23P36406 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM23P36406 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.89□□□□□ -0.19
TRIM23P36406 AC092638.2-201ENST00000441105 947 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 AC079112.1-201ENST00000454972 939 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.89□□□□□ -0.19
TRIM23P36406 SNORD3B-1-201ENST00000577988 758 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 AC132825.4-202ENST00000578792 434 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 AP005264.5-201ENST00000590066 467 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.89□□□□□ -0.19
TRIM23P36406 AC005041.3-201ENST00000606287 649 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 AC107464.3-201ENST00000609172 737 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 RN7SL736P-201ENST00000613111 269 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRIM23P36406 AC091769.1-201ENST00000619576 568 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRIM23P36406 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM23P36406 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRIM23P36406 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TRIM23P36406 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRIM23P36406 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 AC005252.3-201ENST00000623855 2258 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRIM23P36406 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TRIM23P36406 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 PDXDC2P-206ENST00000534700 1315 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 AC041040.2-201ENST00000622926 2899 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRIM23P36406 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM23P36406 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRIM23P36406 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.88□□□□□ -0.19
TRIM23P36406 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM23P36406 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.88□□□□□ -0.19
TRIM23P36406 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM23P36406 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRIM23P36406 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM23P36406 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM23P36406 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRIM23P36406 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 RPL17P11-201ENST00000417593 544 ntBASIC13.88□□□□□ -0.19
TRIM23P36406 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM23P36406 DPY19L2P5-201ENST00000456300 331 ntBASIC13.88□□□□□ -0.19
TRIM23P36406 RN7SL564P-201ENST00000496309 250 ntBASIC13.88□□□□□ -0.19
TRIM23P36406 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM23P36406 AC068867.1-201ENST00000559855 150 ntBASIC13.88□□□□□ -0.19
TRIM23P36406 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
TRIM23P36406 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM23P36406 MIR7845-201ENST00000618396 99 ntBASIC13.88□□□□□ -0.19
TRIM23P36406 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
TRIM23P36406 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRIM23P36406 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM23P36406 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRIM23P36406 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM23P36406 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
TRIM23P36406 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM23P36406 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
TRIM23P36406 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms