Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 KHSRPP1-201ENST00000427983 1768 ntBASIC14.2□□□□□ -0.14
HOXD12P35452 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 DNM1P41-201ENST00000623634 3350 ntBASIC14.2□□□□□ -0.14
HOXD12P35452 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HOXD12P35452 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXD12P35452 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HOXD12P35452 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXD12P35452 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXD12P35452 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 AC012158.2-201ENST00000536546 354 ntBASIC14.2□□□□□ -0.14
HOXD12P35452 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXD12P35452 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 MIR6746-201ENST00000620971 63 ntBASIC14.2□□□□□ -0.14
HOXD12P35452 AC009145.4-201ENST00000625119 1294 ntBASIC14.2□□□□□ -0.14
HOXD12P35452 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXD12P35452 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 AC089987.1-201ENST00000551654 2209 ntBASIC14.2□□□□□ -0.14
HOXD12P35452 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
HOXD12P35452 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HOXD12P35452 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 AC021305.1-201ENST00000520656 1514 ntBASIC14.2□□□□□ -0.14
HOXD12P35452 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.2□□□□□ -0.14
HOXD12P35452 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HOXD12P35452 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 CTBP2P8-201ENST00000422584 1330 ntBASIC14.19□□□□□ -0.14
HOXD12P35452 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.19□□□□□ -0.14
HOXD12P35452 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HOXD12P35452 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.19□□□□□ -0.14
HOXD12P35452 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.19□□□□□ -0.14
HOXD12P35452 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
HOXD12P35452 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.19□□□□□ -0.14
HOXD12P35452 ACTG1P19-201ENST00000418987 1116 ntBASIC14.19□□□□□ -0.14
HOXD12P35452 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.19□□□□□ -0.14
HOXD12P35452 AC092580.1-201ENST00000433998 658 ntBASIC14.19□□□□□ -0.14
HOXD12P35452 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.19□□□□□ -0.14
HOXD12P35452 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.19□□□□□ -0.14
HOXD12P35452 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.19□□□□□ -0.14
HOXD12P35452 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.19□□□□□ -0.14
HOXD12P35452 AC226150.1-201ENST00000544259 466 ntBASIC14.19□□□□□ -0.14
HOXD12P35452 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.19□□□□□ -0.14
HOXD12P35452 AC006158.1-201ENST00000610661 249 ntBASIC14.19□□□□□ -0.14
HOXD12P35452 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.19□□□□□ -0.14
HOXD12P35452 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.19□□□□□ -0.14
HOXD12P35452 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.19□□□□□ -0.14
HOXD12P35452 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.19□□□□□ -0.14
HOXD12P35452 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.19□□□□□ -0.14
HOXD12P35452 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.19□□□□□ -0.14
HOXD12P35452 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.19□□□□□ -0.14
HOXD12P35452 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HOXD12P35452 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXD12P35452 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXD12P35452 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HOXD12P35452 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXD12P35452 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HOXD12P35452 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.18□□□□□ -0.14
HOXD12P35452 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HOXD12P35452 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXD12P35452 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXD12P35452 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXD12P35452 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXD12P35452 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms