Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 KHSRPP1-201ENST00000427983 1768 ntBASIC13.18□□□□□ -0.3
HPS1Q92902 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
HPS1Q92902 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC13.18□□□□□ -0.3
HPS1Q92902 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 KRT18P64-201ENST00000434946 1219 ntBASIC13.18□□□□□ -0.3
HPS1Q92902 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.18□□□□□ -0.3
HPS1Q92902 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.18□□□□□ -0.3
HPS1Q92902 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.18□□□□□ -0.3
HPS1Q92902 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.18□□□□□ -0.3
HPS1Q92902 AC019227.1-201ENST00000526902 510 ntBASIC13.18□□□□□ -0.3
HPS1Q92902 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.18□□□□□ -0.3
HPS1Q92902 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.18□□□□□ -0.3
HPS1Q92902 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 AC000095.1-201ENST00000603208 874 ntBASIC13.18□□□□□ -0.3
HPS1Q92902 AL512343.1-201ENST00000605837 169 ntBASIC13.18□□□□□ -0.3
HPS1Q92902 AL391069.4-201ENST00000609583 481 ntBASIC13.18□□□□□ -0.3
HPS1Q92902 AC020910.4-201ENST00000612269 540 ntBASIC13.18□□□□□ -0.3
HPS1Q92902 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.18□□□□□ -0.3
HPS1Q92902 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HPS1Q92902 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 TNRC18P1-201ENST00000502875 3650 ntBASIC13.18□□□□□ -0.3
HPS1Q92902 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
HPS1Q92902 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
HPS1Q92902 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
HPS1Q92902 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HPS1Q92902 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC13.17□□□□□ -0.3
HPS1Q92902 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HPS1Q92902 POM121L14P-201ENST00000406100 1558 ntBASIC13.17□□□□□ -0.3
HPS1Q92902 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.17□□□□□ -0.3
HPS1Q92902 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HPS1Q92902 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HPS1Q92902 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.17□□□□□ -0.3
HPS1Q92902 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HPS1Q92902 AC022447.6-201ENST00000515522 438 ntBASIC13.17□□□□□ -0.3
HPS1Q92902 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.17□□□□□ -0.3
HPS1Q92902 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms